RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 FAM53BQ14153 422 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 GPR19Q15760 415 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 MSRB3Q8IXL7 192 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 OR8J3Q8NGG0 315 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 TMEM125Q96AQ2 219 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 SPRTNQ9H040 489 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 SLC6A13Q9NSD5 602 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 RXFP3Q9NSD7 469 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 CMTM6Q9NX76 183 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 MS4A12Q9NXJ0 267 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 SLC25A37Q9NYZ2 338 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 PCDHB14Q9Y5E9 798 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 COL5A1P20908 1838 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ZNF860A6NHJ4 632 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 H3BMH7 237 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 NTN3O00634 580 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 NME4O00746 187 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 CIB2O75838 187 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 OR2B3O76000 313 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ANP32DO95626 131 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 FOLR1P15328 257 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 EFNA1P20827 205 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 BUD31P41223 144 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 EMP3P54852 163 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 SKP1P63208 163 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 GRM7Q14831 915 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 RABL3Q5HYI8 236 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 C18orf63Q68DL7 685 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 NIPAL1Q6NVV3 410 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 RNF148Q8N7C7 305 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 CCDC124Q96CT7 223 aaKnown RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 GBP5Q96PP8 586 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 NPLQ9BXD5 320 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.5■□□□□ 0.23
CXXC1-212ENST00000589940 L3MBTL1Q9Y468 752 aa16.5■□□□□ 0.23
CXXC1-212ENST00000589940 OTOGLQ3ZCN5 2332 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 PDPK1O15530 556 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 LRP3O75074 770 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 PRKRAO75569 313 aaKnown RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SORBS2O94875 1100 aaKnown RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CPSF4O95639 269 aaKnown RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 GSNP06396 782 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 NR2F6P10588 404 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 TNFRSF17Q02223 184 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CSRP2Q16527 193 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 GTDC1Q4AE62 458 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 UCN3Q969E3 161 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 EXOSC8Q96B26 276 aaKnown RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 TRIM8Q9BZR9 551 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CD300AQ9UGN4 299 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 UTS2RQ9UKP6 389 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 ERVK-11Q9UQG0 969 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SCN3AQ9NY46 2000 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 PRORSD1PA6NEY8 169 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 GLOD5A6NK44 160 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 D6RAR5 112 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SGK494L7N484 410 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 PGRMC2O15173 223 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 MED26O95402 600 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CPN2P22792 545 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 ME2P23368 584 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 OLR1P78380 273 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 COL9A2Q14055 689 aaPredicted RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SPATS1Q496A3 300 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 RUNDC3AQ59EK9 446 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SLC48A1Q6P1K1 146 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 NET1Q7Z628 596 aaPredicted RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 NAXDQ8IW45 347 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 TTC29Q8NA56 475 aaPredicted RBP16.49■□□□□ 0.23
CXXC1-212ENST00000589940 OR9A4Q8NGU2 314 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 CCDC74BQ96LY2 380 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 FANCEQ9HB96 536 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 NCDNQ9UBB6 729 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 SPACA6W5XKT8 324 aa16.49■□□□□ 0.23
CXXC1-212ENST00000589940 A0A1W2PRB8 838 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 A8MUI8 341 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 FOXS1O43638 330 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 DNAJB6O75190 326 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 C6orf47O95873 294 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 TLX1P31314 330 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-212ENST00000589940 FRKP42685 505 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-212ENST00000589940 PCBP4P57723 403 aaKnown RBP16.48■□□□□ 0.23
CXXC1-212ENST00000589940 MTPNP58546 118 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 FAM180BQ6P0A1 224 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 SLITRK4Q8IW52 837 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 RCBTB1Q8NDN9 531 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 OR5T3Q8NGG3 340 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 OR4A15Q8NGL6 344 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 OR1L3Q8NH93 324 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 GOT1L1Q8NHS2 421 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-212ENST00000589940 SH3GL1Q99961 368 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 DENND2DQ9H6A0 471 aaPredicted RBP16.48■□□□□ 0.23
CXXC1-212ENST00000589940 SLC35C2Q9NQQ7 365 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 PRDM9Q9NQV7 894 aa16.48■□□□□ 0.23
CXXC1-212ENST00000589940 FGF21Q9NSA1 209 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms