RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SGCZQ96LD1 299 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 RUNDC3BQ96NL0 473 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 EGFL8Q99944 293 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 CNPPD1Q9BV87 410 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 DMRT3Q9NQL9 472 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 SLC22A14Q9Y267 594 aa14.1□□□□□ -0.15
ACTN4-211ENST00000589528 RPH3AQ9Y2J0 694 aaPredicted RBP14.1□□□□□ -0.15
ACTN4-211ENST00000589528 MYOCOSA0A1B0GUC4 107 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 DVL2O14641 736 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 HCN1O60741 890 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 RAF1P04049 648 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 CELA3AP09093 270 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 PGAM1P18669 254 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 BMP5P22003 454 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 ADSLP30566 484 aaPredicted RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 CXCR5P32302 372 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 HNRNPFP52597 415 aaKnown RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 PLA2G16P53816 162 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 CRYMQ14894 314 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 TRIM40Q6P9F5 258 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 Q71RC1 249 aaPredicted RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 LIX1Q8N485 282 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 TMEM52Q8NDY8 209 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 OR14A16Q8NHC5 309 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 FAM222BQ8WU58 562 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 MBD6Q96DN6 1003 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 ALOXE3Q9BYJ1 711 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 PPANQ9NQ55 473 aaKnown RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 TUBA8Q9NY65 449 aaPredicted RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 COPS7AQ9UBW8 275 aa14.09□□□□□ -0.15
ACTN4-211ENST00000589528 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
ACTN4-211ENST00000589528 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 SYT5O00445 386 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 CCDC175P0C221 793 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 CCL3P10147 92 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 HNRNPH1P31943 449 aaKnown RBP14.08□□□□□ -0.16
ACTN4-211ENST00000589528 MAGEA3P43357 314 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 ASCL1P50553 236 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 KCNJ2P63252 427 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 RNF4P78317 190 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.165e-7■■■□□ 18.5
ACTN4-211ENST00000589528 PAMR1Q6UXH9 720 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 KRT78Q8N1N4 520 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 FBXW8Q8N3Y1 598 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 SPC24Q8NBT2 197 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 MAGOHBQ96A72 148 aaKnown RBP14.08□□□□□ -0.16
ACTN4-211ENST00000589528 MS4A6EQ96DS6 147 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 SIGLEC10Q96LC7 697 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 AICDAQ9GZX7 198 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 LZTFL1Q9NQ48 299 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 CBLCQ9ULV8 474 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 BOKQ9UMX3 212 aaPredicted RBP14.08□□□□□ -0.16
ACTN4-211ENST00000589528 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.16
ACTN4-211ENST00000589528 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.08□□□□□ -0.16
ACTN4-211ENST00000589528 DNHD1Q96M86 4753 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 GOLGA6L6A8MZA4 724 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 C17orf105B2RV13 164 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 WDR47O94967 919 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 TTC4O95801 387 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 AHSGP02765 367 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 C1GALT1C1LP0DN25 315 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 COX7A2P14406 83 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 GNAZP19086 355 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 TACR1P25103 407 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 PIGAP37287 484 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 HYAL4Q2M3T9 481 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 DEFB113Q30KQ7 82 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 SLC22A10Q63ZE4 541 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 FAM45BPQ6NSW5 357 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 TMIGD1Q6UXZ0 262 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 FRA10AC1Q70Z53 315 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 AGGF1Q8N302 714 aaeCLIP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 OR8K3Q8NH51 312 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 FAM45AQ8TCE6 357 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 SLC2A12Q8TD20 617 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 RNASE6Q93091 150 aaKnown RBP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 C18orf12Q96KH6 178 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 JSRP1Q96MG2 331 aaPredicted RBP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 SERINC2Q96SA4 455 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 CSF3RQ99062 836 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 REXO4Q9GZR2 422 aaKnown RBP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 VTI1BQ9UEU0 232 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 FOXD3Q9UJU5 478 aaPredicted RBP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 CLDN16Q9Y5I7 305 aa14.07□□□□□ -0.16
ACTN4-211ENST00000589528 HRNRQ86YZ3 2850 aaPredicted RBP14.07□□□□□ -0.16
ACTN4-211ENST00000589528 LRIT2A6NDA9 550 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 TUBAL3A6NHL2 446 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 CTNSO60931 367 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 CERS1P27544 350 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 GSTM2P28161 218 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 GABRB3P28472 473 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 PGGT1BP53609 377 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 MTTPP55157 894 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 LIM2P55344 173 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 TGM3Q08188 693 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 FOXO1Q12778 655 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 TBL3Q12788 808 aaKnown RBP14.06□□□□□ -0.16
ACTN4-211ENST00000589528 ASPHQ12797 758 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 SERTAD2Q14140 314 aa14.06□□□□□ -0.16
ACTN4-211ENST00000589528 SLBPQ14493 270 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms