RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PRDM7Q9NQW5 492 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 SEMA3GQ9NS98 782 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 DDX18Q9NVP1 670 aaKnown RBP9.88□□□□□ -0.83
VPS25-203ENST00000589520 MS4A12Q9NXJ0 267 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
VPS25-203ENST00000589520 COL4A2P08572 1712 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SPTY2D1-AS1A0A0U1RR47 76 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 OR2A25A4D2G3 310 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 TRIM64CA6NLI5 447 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 C5orf58C9J3I9 102 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SLC16A6O15403 523 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ERI3O43414 337 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 TMPRSS11DO60235 418 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 TFAP2AP05549 437 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 IGHV4-34P06331 123 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SLC35G6P0C7Q6 338 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 CTSEP14091 401 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ATP5A1P25705 553 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 AK4P27144 223 aaPredicted RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 PEBP1P30086 187 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 MPIP34949 423 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SOAT1P35610 550 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ALDH9A1P49189 494 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 PLA2G16P53816 162 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ITGA1P56199 1179 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 EEF1A2Q05639 463 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 HYAL2Q12891 473 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SIM2Q14190 667 aaPredicted RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 NUMA1Q14980 2115 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 RBM48Q5RL73 367 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 KIAA1614Q5VZ46 1190 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 REEP3Q6NUK4 255 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 TBPL2Q6SJ96 375 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SPESP1Q6UW49 350 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 C6orf120Q7Z4R8 191 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 THAP5Q7Z6K1 395 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 RNF130Q86XS8 419 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 NRROSQ86YC3 692 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 C8orf59Q8N0T1 100 aaPredicted RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 SDR16C5Q8N3Y7 309 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ACOT4Q8N9L9 421 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SETD9Q8NE22 299 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 TM4SF19Q96DZ7 209 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 KLHDC7BQ96G42 594 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 EPYCQ99645 322 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SPATA5L1Q9BVQ7 753 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SORBS1Q9BX66 1292 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 LMAN1LQ9HAT1 526 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 THSD1Q9NS62 852 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 GPATCH2Q9NW75 528 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 FAM118AQ9NWS6 357 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 SPHK1Q9NYA1 384 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 ENOPH1Q9UHY7 261 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 PHF11Q9UIL8 331 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 BLOC1S6Q9UL45 172 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 NDRG2Q9UN36 371 aaKnown RBP9.87□□□□□ -0.83
VPS25-203ENST00000589520 ASB4Q9Y574 426 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 REV3LO60673 3130 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 PCM1Q15154 2024 aa9.87□□□□□ -0.83
VPS25-203ENST00000589520 MYO1GB0I1T2 1018 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 H0Y8X5 98 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 M0QX08 132 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 RTCAO00442 366 aaKnown RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 BTN3A3O00478 584 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 HAT1O14929 419 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 ZSCAN9O15535 394 aaPredicted RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 NARSO43776 548 aaKnown RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 JRKO75564 520 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 SERPINB7O75635 380 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 SNAP29O95721 258 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 C9P02748 559 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 MT-ND1P03886 318 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 ASGR2P07307 311 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 THEGLP0DJG4 465 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 ITGAMP11215 1152 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 ETFAP13804 333 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 CSNK2A2P19784 350 aaPredicted RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 TLX1P31314 330 aaPredicted RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 RYKP34925 604 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 BUD31P41223 144 aaPredicted RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 CCT3P49368 545 aaKnown RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 PCBP3P57721 371 aaKnown RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 ESRRGP62508 458 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 KCNJ10P78508 379 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 KCNC4Q03721 635 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 SLAMF1Q13291 335 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 PLCL1Q15111 1095 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
VPS25-203ENST00000589520 CEBPEQ15744 281 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 LEXMQ3ZCV2 418 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 SPDYE7PQ495Y7 208 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 PRRT3Q5FWE3 981 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 TOR1AIP1Q5JTV8 583 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 NDUFAF5Q5TEU4 345 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 RNF220Q5VTB9 566 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 PRAMEF8Q5VWM4 474 aa9.86□□□□□ -0.83
VPS25-203ENST00000589520 PRAMEF7Q5VXH5 474 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms