RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 HIST1H1TP22492 207 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 EEF1DP29692 281 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ECHS1P30084 290 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 GMPRP36959 345 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 PIK3CBP42338 1070 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 MAGEA12P43365 314 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 CCNG1P51959 295 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ARFIP1P53367 373 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 BTG2P78543 158 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 TUBA3CQ13748 450 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 RUNX2Q13950 521 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ELAVL1Q15717 326 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 C10orf62Q5T681 223 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 KHDRBS2Q5VWX1 349 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 TUBA3EQ6PEY2 450 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 TRMT10CQ7L0Y3 403 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 GOLGA7Q7Z5G4 137 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 VN1R5Q7Z5H4 357 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 RPS19BP1Q86WX3 136 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 PTGR2Q8N8N7 351 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 OR7G3Q8NG95 312 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 OR14A16Q8NHC5 309 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 HUS1BQ8NHY5 278 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ZNF473Q8WTR7 871 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 TMEM125Q96AQ2 219 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 RGMAQ96B86 450 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 MTBPQ96DY7 904 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 F2RL3Q96RI0 385 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 CDCP1Q9H5V8 836 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 LYARQ9NX58 379 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 MS4A12Q9NXJ0 267 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 XPR1Q9UBH6 696 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 COPS7AQ9UBW8 275 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 PHF11Q9UIL8 331 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ERRFI1Q9UJM3 462 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ZNF490Q9ULM2 529 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 ASB1Q9Y576 335 aa9.91□□□□□ -0.82
CLPTM1-211ENST00000589347 NIPBLQ6KC79 2804 aaeCLIP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 IQANK1A0A1B0GTG1 560 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 A0A1B0GUH1 482 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 HMX2A2RU54 273 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TRIM49D1C9J1S8 452 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 FAM227AF5H4B4 570 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 H0YIV9 168 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 STX16-NPEPL1H3BU86 382 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 STX16O14662 325 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 DNAJB6O75190 326 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SCELO95171 688 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CLDN9O95484 217 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TGFB1P01137 390 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SNRPAP09012 282 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 MTHFD2P13995 350 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TAC1P20366 129 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CPN2P22792 545 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TPP2P29144 1249 aaPredicted RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TLX1P31314 330 aaPredicted RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 BUD31P41223 144 aaPredicted RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CYB561P49447 251 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CASP6P55212 293 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 MLF1P58340 268 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 BIKQ13323 160 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 TTC19Q6DKK2 380 aaPredicted RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 ADNP2Q6IQ32 1131 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 GFRALQ6UXV0 394 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CLNKQ7Z7G1 428 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 LCA5Q86VQ0 697 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SHISA5Q8N114 240 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SLC34A3Q8N130 599 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 KIF2BQ8N4N8 673 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 ACOT4Q8N9L9 421 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 MDS2Q8NDY4 140 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 DCAKDQ8WVC6 231 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CSF3RQ99062 836 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 MRPL57Q9BQC6 102 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 MRPL46Q9H2W6 279 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 IPPKQ9H8X2 491 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 WDR41Q9HAD4 459 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 DMRT3Q9NQL9 472 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 LRFN1Q9P244 771 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SUCOQ9UBS9 1254 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 SEC14L3Q9UDX4 400 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 FBXW2Q9UKT8 454 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 NFU1Q9UMS0 254 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 OSGIN2Q9Y236 505 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 CLCA3PQ9Y6N3 262 aa9.9□□□□□ -0.82
CLPTM1-211ENST00000589347 ABCA2Q9BZC7 2435 aa9.9□□□□□ -0.83
CLPTM1-211ENST00000589347 PRAMEF4O60810 478 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 CTNSO60931 367 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 SLC25A12O75746 678 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ZFAND5O76080 213 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TBX6O95947 436 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PRF1P14222 555 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TNNI3P19429 210 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ATP5A1P25705 553 aaKnown RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PTX3P26022 381 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TDGF1P3P51864 188 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 PLIN5Q00G26 463 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 TNFRSF17Q02223 184 aa9.89□□□□□ -0.83
CLPTM1-211ENST00000589347 ALDH6A1Q02252 535 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms