RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 MLIPQ5VWP3 458 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ANKRD34AQ69YU3 496 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 FAM71E1Q6IPT2 247 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 Q6ZNX1 250 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 TUBA1AQ71U36 451 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ERN2Q76MJ5 926 aaKnown RBP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF605Q86T29 641 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ADCK1Q86TW2 530 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 TMCO5AQ8N6Q1 288 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF366Q8N895 744 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ZSCAN1Q8NBB4 408 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 DENND6BQ8NEG7 585 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 PHF10Q8WUB8 498 aaKnown RBP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 RASSF5Q8WWW0 418 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ING5Q8WYH8 240 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 MAL2Q969L2 176 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 FKBP10Q96AY3 582 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 VMP1Q96GC9 406 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 OR51B5Q9H339 312 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 MTG2Q9H4K7 406 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 RASSF1Q9NS23 344 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 THSD1Q9NS62 852 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 PLCXD1Q9NUJ7 323 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 EXD2Q9NVH0 621 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 FAIMQ9NVQ4 179 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 DNAJB12Q9NXW2 375 aaKnown RBP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 NDUFAF4Q9P032 175 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ERVK-18Q9QC07 812 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ICKQ9UPZ9 632 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 ITM2BQ9Y287 266 aa7.07□□□□□ -1.28
ZNF540-206ENST00000589117 HELZP42694 1942 aaKnown RBP7.07□□□□□ -1.28
ZNF540-206ENST00000589117 GPR89AB7ZAQ6 455 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PDE9AO76083 593 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 OCM2P0CE71 109 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 OCMP0CE72 109 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GPR89BP0CG08 455 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ETFAP13804 333 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF8P17098 575 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 EPHA1P21709 976 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SOAT1P35610 550 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PXNP49023 591 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CLK1P49759 484 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GP2P55259 537 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 NTHL1P78549 312 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PIGFQ07326 219 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CNTN1Q12860 1018 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LAPTM4AQ15012 233 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 FBXO43Q4G163 708 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 C9orf64Q5T6V5 341 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LAIR2Q6ISS4 152 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 REEP3Q6NUK4 255 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 FIGNL1Q6PIW4 674 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ARMCX6Q7L4S7 300 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GALNT10Q86SR1 603 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF554Q86TJ5 538 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PLD3Q8IV08 490 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PARP8Q8N3A8 854 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ABHD11Q8NFV4 315 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 OR10G2Q8NGC3 310 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TFGQ92734 400 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PLPPR2Q96GM1 343 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF300Q96RE9 604 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 FEVQ99581 238 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PIP5K1AQ99755 562 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 COPS4Q9BT78 406 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 MTIF3Q9H2K0 278 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ACOT13Q9NPJ3 140 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 C1GALT1Q9NS00 363 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PAK1IP1Q9NWT1 392 aaPredicted RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ERVK-11Q9UQG0 969 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 COQ6Q9Y2Z9 468 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF451Q9Y4E5 1061 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TESMINQ9Y4I5 508 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LYVE1Q9Y5Y7 322 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PLXNA2O75051 1894 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 TBC1D3BA6NDS4 549 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CLDN24A6NM45 220 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SAP18O00422 153 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PLK4O00444 970 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SUSD5O60279 629 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 LILRB5O75023 590 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 PAPLNO95428 1278 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 IFNW1P05000 195 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 EPCAMP16422 314 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CEBPBP17676 345 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 RHCEP18577 417 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CD247P20963 164 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 ACADLP28330 430 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 KRT20P35900 424 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 GGT2P36268 569 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CCR8P51685 355 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 MAPK12P53778 367 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 MANFP55145 182 aaKnown RBP7.06□□□□□ -1.28
ZNF540-206ENST00000589117 SMIM11AP58511 58 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 CDC42P60953 191 aa7.06□□□□□ -1.28
ZNF540-206ENST00000589117 DSTNP60981 165 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms