RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 STMN4Q9H169 189 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SLC25A18Q9H1K4 315 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 PRTFDC1Q9NRG1 225 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 RIC8BQ9NVN3 520 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 TP53TG5Q9Y2B4 290 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 ASB4Q9Y574 426 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SPENQ96T58 3664 aaKnown RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 SEC24DO94855 1032 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 GBAP04062 536 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 PRB1P04280 392 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 CHRNGP07510 517 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 TPP2P29144 1249 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 HSD17B7P56937 341 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 ZNF33BQ06732 778 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 RAPSNQ13702 412 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 RCN2Q14257 317 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 MYBPC3Q14896 1274 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 SFT2D3Q587I9 215 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 CES4AQ5XG92 561 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 TCTN3Q6NUS6 607 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 SCIMPQ6UWF3 145 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 GPR180Q86V85 440 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 NUDT13Q86X67 352 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 TUBB6Q9BUF5 446 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 KCNK9Q9NPC2 374 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 ZNF71Q9NQZ8 489 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 VPS29Q9UBQ0 182 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 ADAM29Q9UKF5 820 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 MRPS33Q9Y291 106 aaKnown RBP18.96■□□□□ 0.63
DDX39A-207ENST00000588542 ATG4BQ9Y4P1 393 aa18.96■□□□□ 0.63
DDX39A-207ENST00000588542 GOLGA6L10A6NI86 522 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CLDN4O14493 209 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 PROM1O43490 865 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 C1QL1O75973 258 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 ZWINTO95229 277 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 KLK1P06870 262 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CELA2AP08217 269 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 FAM58BPP0C7Q3 252 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 UROSP10746 265 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CPN2P22792 545 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 ITGA3P26006 1051 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 OR4D2P58180 307 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 MAGOHP61326 146 aaKnown RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 ARL13AQ5H913 290 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 C18orf63Q68DL7 685 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CLEC6AQ6EIG7 209 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 COMMD6Q7Z4G1 85 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CUZD1Q86UP6 607 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 NUDCD3Q8IVD9 361 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 EFCAB3Q8N7B9 438 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 GBP7Q8N8V2 638 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 CHTF18Q8WVB6 975 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 ARL8AQ96BM9 186 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 SMAD5Q99717 465 aaKnown RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 ZNF552Q9H707 407 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 LYARQ9NX58 379 aaKnown RBP18.95■□□□□ 0.62
DDX39A-207ENST00000588542 GPR83Q9NYM4 423 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 AHSPQ9NZD4 102 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 PHF11Q9UIL8 331 aa18.95■□□□□ 0.62
DDX39A-207ENST00000588542 A0A1W2PR48 441 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 BIRC5O15392 142 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 CTNSO60931 367 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 PRR35P0CG20 571 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 HMGCS1Q01581 520 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 TNFRSF17Q02223 184 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 SLC13A2Q13183 592 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 LACTB2Q53H82 288 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-207ENST00000588542 PAPD4Q6PIY7 484 aaKnown RBP18.94■□□□□ 0.62
DDX39A-207ENST00000588542 CYP20A1Q6UW02 462 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 PAGE2Q7Z2X7 111 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 CLNKQ7Z7G1 428 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 KBTBD2Q8IY47 623 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 C1orf52Q8N6N3 182 aaKnown RBP18.94■□□□□ 0.62
DDX39A-207ENST00000588542 PSMF1Q92530 271 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 THOC3Q96J01 351 aaKnown RBP18.94■□□□□ 0.62
DDX39A-207ENST00000588542 LHPPQ9H008 270 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 NMRK1Q9NWW6 199 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 MS4A12Q9NXJ0 267 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 SPACA6W5XKT8 324 aa18.94■□□□□ 0.62
DDX39A-207ENST00000588542 CROCCQ5TZA2 2017 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 TMEM120BA0PK00 339 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 WDR91A4D1P6 747 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 BLACEA4D250 179 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 AZIN1O14977 448 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 LDB3O75112 727 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 PRKRAO75569 313 aaKnown RBP18.93■□□□□ 0.62
DDX39A-207ENST00000588542 CRCPO75575 148 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 SERPINA7P05543 415 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 PPP2R1BP30154 601 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 SERPINB5P36952 375 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 PGDP52209 483 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 ACTN3Q08043 901 aaPredicted RBP18.93■□□□□ 0.62
DDX39A-207ENST00000588542 AGBL2Q5U5Z8 902 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 PLAG1Q6DJT9 500 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 HDXQ7Z353 690 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 TRIM46Q7Z4K8 759 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 SREK1Q8WXA9 508 aaKnown RBP18.93■□□□□ 0.62
DDX39A-207ENST00000588542 UCN3Q969E3 161 aa18.93■□□□□ 0.62
DDX39A-207ENST00000588542 ANKRD9Q96BM1 317 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms