RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 GAL3ST2Q9H3Q3 398 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 DDX31Q9H8H2 851 aaKnown RBP5.4□□□□□ -1.54
LINC01538-201ENST00000588074 NT5MQ9NPB1 228 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 LTB4R2Q9NPC1 389 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 SERINC1Q9NRX5 453 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 DUS2Q9NX74 493 aaKnown RBP5.4□□□□□ -1.54
LINC01538-201ENST00000588074 PIM2Q9P1W9 311 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 SPASTQ9UBP0 616 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 WARS2Q9UGM6 360 aaKnown RBP5.4□□□□□ -1.54
LINC01538-201ENST00000588074 SSR3Q9UNL2 185 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 SHOC2Q9UQ13 582 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 POLR3HQ9Y535 204 aaPredicted RBP5.4□□□□□ -1.54
LINC01538-201ENST00000588074 PCDHA10Q9Y5I2 948 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 PEX16Q9Y5Y5 336 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 LYVE1Q9Y5Y7 322 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 FPGT-TNNI3KV9GXZ4 949 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 SPATA31A6Q5VVP1 1343 aa5.4□□□□□ -1.54
LINC01538-201ENST00000588074 MED1Q15648 1581 aaPredicted RBP5.4□□□□□ -1.54
LINC01538-201ENST00000588074 FAM95CA0A1B0GW59 222 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 A8MXK9 166 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FOXO6A8MYZ6 492 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 GPR89AB7ZAQ6 455 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 COPEO14579 308 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 SEC14L5O43304 696 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 PRKAB2O43741 272 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 PRKYO43930 277 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 METTL18O95568 372 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 DIRAS3O95661 229 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 RAF1P04049 648 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 GPR89BP0CG08 455 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 RALAP11233 206 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CYP19A1P11511 503 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CETPP11597 493 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 BMP3P12645 472 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 HLA-EP13747 358 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 HOXB4P17483 251 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 NELFEP18615 380 aaKnown RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 ACADLP28330 430 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 ETV6P41212 452 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 BUD31P41223 144 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 NR0B1P51843 470 aaKnown RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 GAGE1Q13065 139 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CYP1B1Q16678 543 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 PRRT3Q5FWE3 981 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 NXNL2Q5VZ03 156 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CDC73Q6P1J9 531 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 LAYNQ6UX15 382 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 C16orf89Q6UX73 402 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 DPP8Q6V1X1 898 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FAM92BQ6ZTR7 304 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FAM160B2Q86V87 743 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 TRIM69Q86WT6 500 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 SLC13A5Q86YT5 568 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 ARID3BQ8IVW6 561 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 C8orf59Q8N0T1 100 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 C9orf62Q8N4C0 152 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CPEB3Q8NE35 698 aaKnown RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 ADAMTS14Q8WXS8 1223 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 TOP1MTQ969P6 601 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 BIRC7Q96CA5 298 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FAM84BQ96KN1 310 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FER1L6-AS2Q96M78 137 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 LENG8Q96PV6 779 aaPredicted RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 TRNT1Q96Q11 434 aaKnown RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 LHPPQ9H008 270 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 FAM83DQ9H4H8 585 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 PCDH9Q9HC56 1237 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 MRPL47Q9HD33 250 aaKnown RBP5.4□□□□□ -1.55
LINC01538-201ENST00000588074 XPNPEP1Q9NQW7 623 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 GKN1Q9NS71 199 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 NINJ2Q9NZG7 142 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 DKK4Q9UBT3 224 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 ZDHHC8Q9ULC8 765 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 KCNJ14Q9UNX9 436 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CA5BQ9Y2D0 317 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 CPS1P31327 1500 aa5.4□□□□□ -1.55
LINC01538-201ENST00000588074 NUDT19A8MXV4 375 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 TCP10L2B9ZVM9 353 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 E7ENX8 843 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 F8VP50 259 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 M0QYV0 167 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 SLC28A1O00337 649 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 SELENOFO60613 162 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 RAD1O60671 282 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 DPM1O60762 260 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 PMPCBO75439 489 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 BCAS2O75934 225 aaPredicted RBP5.39□□□□□ -1.55
LINC01538-201ENST00000588074 SCAF4O95104 1147 aaKnown RBP5.39□□□□□ -1.55
LINC01538-201ENST00000588074 MED26O95402 600 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 CER1O95813 267 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 PCCAP05165 728 aaPredicted RBP5.39□□□□□ -1.55
LINC01538-201ENST00000588074 CD3GP09693 182 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 GIFP27352 417 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 RYKP34925 604 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 CEACAM6P40199 344 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 DHPSP49366 369 aaPredicted RBP5.39□□□□□ -1.55
LINC01538-201ENST00000588074 GABARAPL2P60520 117 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 IL13RA1P78552 427 aa5.39□□□□□ -1.55
LINC01538-201ENST00000588074 CSTF1Q05048 431 aaKnown RBP5.39□□□□□ -1.55
LINC01538-201ENST00000588074 GANABQ14697 944 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms