RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TNFRSF1BP20333 461 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 CNR2P34972 360 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 PREPP48147 710 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 VASPP50552 380 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-206ENST00000587730 ERAP2Q6P179 960 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 NXPE4Q6UWF7 544 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 TMC5Q6UXY8 1006 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 IL17RDQ8NFM7 739 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 SLC5A11Q8WWX8 675 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF486Q96H40 463 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-206ENST00000587730 NEUROD4Q9HD90 331 aa17.74■□□□□ 0.43
DDX39A-206ENST00000587730 CCDC177Q9NQR7 707 aaPredicted RBP17.74■□□□□ 0.43
DDX39A-206ENST00000587730 IRGMA1A4Y4 181 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 PRAMEF25A6NGN4 478 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 CCNKO75909 580 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 SEMA3DO95025 777 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 MYCP01106 439 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-206ENST00000587730 INHAP05111 366 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 TIMP2P16035 220 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 DDX6P26196 483 aaKnown RBP eCLIP17.73■□□□□ 0.43
DDX39A-206ENST00000587730 SOAT1P35610 550 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 TAS2R50P59544 299 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 CYP4F2P78329 520 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 MLLT1Q03111 559 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-206ENST00000587730 NDUFA9Q16795 377 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 CASP12Q6UXS9 341 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 KRT78Q8N1N4 520 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 SLAIN1Q8ND83 568 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 OR8J1Q8NGP2 316 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 OR9A1PQ8NGU1 263 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 OR5P2Q8WZ92 322 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 NEURL3Q96EH8 262 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF764Q96H86 408 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF514Q96K75 400 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-206ENST00000587730 DHRS1Q96LJ7 313 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 SNX18Q96RF0 628 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 ASAH2Q9NR71 780 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF221Q9UK13 617 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 STUB1Q9UNE7 303 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 PLXNA2O75051 1894 aa17.73■□□□□ 0.43
DDX39A-206ENST00000587730 IQCMA0A1B0GVH7 501 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 FAM172BPA6NC97 362 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 TMEM202A6NGA9 273 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 PI15O43692 258 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 FGF19O95750 216 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 GASTP01350 101 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 CTSCP53634 463 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ALDH6A1Q02252 535 aaKnown RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OCLNQ16625 522 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF805Q5CZA5 627 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 TMEM220Q6QAJ8 160 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 MMAAQ8IVH4 418 aaKnown RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 PROKR2Q8NFJ6 384 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF689Q96CS4 500 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 AP2M1Q96CW1 435 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OR5M11Q96RB7 305 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ASPNQ9BXN1 380 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OGDHLQ9ULD0 1010 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF670-ZNF695F2Z2N8 137 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 LGI1O95970 557 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ITGB7P26010 798 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 PPM1AP35813 382 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ATN1P54259 1190 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OR2B6P58173 313 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 CNTN1Q12860 1018 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 MLLT11Q13015 90 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 SPHARQ15513 63 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 LRRC73Q5JTD7 316 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 SLC25A30Q5SVS4 291 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 DCST1Q5T197 706 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 RSBN1Q5VWQ0 802 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 C12orf73Q69YU5 71 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 CIDECQ96AQ7 238 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 QRFPRQ96P65 431 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OPALINQ96PE5 141 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF607Q96SK3 696 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 SYNDIG1Q9H7V2 258 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 NEK6Q9HC98 313 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 NDUFB11Q9NX14 153 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 QPCTLQ9NXS2 382 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 FAM8A1Q9UBU6 413 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 POU2F3Q9UKI9 436 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 LSM2Q9Y333 95 aaKnown RBP17.72■□□□□ 0.43
DDX39A-206ENST00000587730 OBSL1O75147 1896 aa17.72■□□□□ 0.43
DDX39A-206ENST00000587730 FAM47E-STBD1D6RA91 191 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 TEX28O15482 410 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 CAPN5O15484 640 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-206ENST00000587730 LEFTY1O75610 366 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 ELFN1P0C7U0 828 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 SPNP16150 400 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 TNFSF8P32971 234 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 COX10Q12887 443 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 SSX1Q16384 188 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 ZNF658BQ4V348 819 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-206ENST00000587730 SAXO2Q658L1 398 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 ADNP2Q6IQ32 1131 aa17.71■□□□□ 0.43
DDX39A-206ENST00000587730 TMPRSS11AQ6ZMR5 421 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms