RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 KMOO15229 486 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 OXSR1O95747 527 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 RECKO95980 971 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 CNR2P34972 360 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 SLC15A1P46059 708 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 EPHA5P54756 1037 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 DEFA1P59665 94 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 DEFA3P59666 94 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 TSTA3Q13630 321 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 DUSP7Q16829 419 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 UNC5DQ6UXZ4 953 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 MTERF3Q96E29 417 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 NUAK2Q9H093 628 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 NMNAT1Q9HAN9 279 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 DYRK1BQ9Y463 629 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 IRAK3Q9Y616 596 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 TSPAN11A1L157 253 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 IFNW1P05000 195 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 KLK1P06870 262 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 FOXD4Q12950 439 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 STARD3Q14849 445 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 TMEM215Q68D42 235 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 HIST2H2AA3Q6FI13 130 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 CHAC2Q8WUX2 184 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 TRNT1Q96Q11 434 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 TAPBPLQ9BX59 468 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 SGPP1Q9BX95 441 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 KCND3Q9UK17 655 aa16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 RBMX2Q9Y388 322 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-205ENST00000587327 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.17
PRKCSH-205ENST00000587327 PDE4DIPQ5VU43 2346 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 LOC110117498-PIK3R3F6TDL0 507 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 FFAR1O14842 300 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 DYRK3O43781 588 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 PIPP12273 146 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 SOAT1P35610 550 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 ALDH9A1P49189 494 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 DOC2BQ14184 412 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 PUM1Q14671 1186 aaKnown RBP eCLIP16.08■□□□□ 0.169e-7■□□□□ 10.7
PRKCSH-205ENST00000587327 SSX1Q16384 188 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF658BQ4V348 819 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 CCDC92Q53HC0 331 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC30A8Q8IWU4 369 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 TAGAPQ8N103 731 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 FAM46DQ8NEK8 389 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 WDR36Q8NI36 951 aaKnown RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 PIK3R3Q92569 461 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 AP2M1Q96CW1 435 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 SDHCQ99643 169 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC6A16Q9GZN6 736 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 HOXD1Q9GZZ0 328 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 ITM2CQ9NQX7 267 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 CXXC1Q9P0U4 656 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 NOTCH4Q99466 2003 aa16.08■□□□□ 0.16
PRKCSH-205ENST00000587327 CTDSP2O14595 271 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 CTSLP07711 333 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 POU1F1P28069 291 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 MEF2AQ02078 507 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 TP53BP2Q13625 1128 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 REEP3Q6NUK4 255 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 DPPA4Q7L190 304 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 CLIP4Q8N3C7 705 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 LMNTD1Q8N9Z9 388 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 SNX8Q9Y5X2 465 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 DSPPQ9NZW4 1301 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 A0A075B6Q4 140 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 A8MU76 341 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 GPX5O75715 221 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 APOA1P02647 267 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 TYRP14679 529 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 XPAP23025 273 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 CASP3P42574 277 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 LIM2P55344 173 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 DSTNP60981 165 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 CFAP206Q8IYR0 622 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 MRPL43Q8N983 215 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 APOBEC4Q8WW27 367 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 SORCS1Q8WY21 1168 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 IRF7Q92985 503 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 KCNS3Q9BQ31 491 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC30A2Q9BRI3 323 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 LINC00597Q9H2U6 94 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 SPNS1Q9H2V7 528 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 SLC25A19Q9HC21 320 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 FZD3Q9NPG1 666 aa16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-205ENST00000587327 FAM227AF5H4B4 570 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ENTPD6O75354 484 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 SCG5P05408 212 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 RHOP08100 348 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 IL3P08700 152 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ELFN1P0C7U0 828 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 UQCRC2P22695 453 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 DDX6P26196 483 aaKnown RBP eCLIP16.06■□□□□ 0.166e-7■□□□□ 8.8
PRKCSH-205ENST00000587327 TAP2Q03519 686 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 POM121L1PQ3SYA9 428 aa16.06■□□□□ 0.16
PRKCSH-205ENST00000587327 ZNF805Q5CZA5 627 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms