RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CPN2P22792 545 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 PIK3CBP42338 1070 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.24
TPM4-206ENST00000587201 ZNF468Q5VIY5 522 aaPredicted RBP16.52■□□□□ 0.24
TPM4-206ENST00000587201 OR4C11Q6IEV9 310 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.24
TPM4-206ENST00000587201 GFRALQ6UXV0 394 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 TMEM132CQ8N3T6 1108 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 THAP3Q8WTV1 239 aaPredicted RBP16.52■□□□□ 0.24
TPM4-206ENST00000587201 NCLNQ969V3 563 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 RGMAQ96B86 450 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 VMP1Q96GC9 406 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 SCMH1Q96GD3 660 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 CCDC77Q9BR77 488 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 SORBS1Q9BX66 1292 aaKnown RBP16.52■□□□□ 0.24
TPM4-206ENST00000587201 ALOXE3Q9BYJ1 711 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 DMRT3Q9NQL9 472 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 TMCO1Q9UM00 188 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 TSC22D4Q9Y3Q8 395 aa16.52■□□□□ 0.24
TPM4-206ENST00000587201 USP9YO00507 2555 aaPredicted RBP16.52■□□□□ 0.23
TPM4-206ENST00000587201 H0YIV9 168 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 LRRTM2O43300 516 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 LDB3O75112 727 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 NEURL1O76050 574 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 SCELO95171 688 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 SP1P08047 785 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 SNRPAP09012 282 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 MST1P26927 711 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 CYB561P49447 251 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 KCNK10P57789 538 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 RPS13P62277 151 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 ELAVL1Q15717 326 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 C4orf17Q53FE4 359 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 LGSNQ5TDP6 509 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 SLC25A25Q6KCM7 469 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 GALNTL5Q7Z4T8 443 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 FAM98AQ8NCA5 519 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 DAZLQ92904 295 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 NOL11Q9H8H0 719 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 SEC14L3Q9UDX4 400 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 PPIEQ9UNP9 301 aaKnown RBP16.51■□□□□ 0.23
TPM4-206ENST00000587201 RNF11Q9Y3C5 154 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 CLCA3PQ9Y6N3 262 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 SVILO95425 2214 aa16.51■□□□□ 0.23
TPM4-206ENST00000587201 WIPF3A6NGB9 483 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 STX16-NPEPL1H3BU86 382 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 STX16O14662 325 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 SLC25A12O75746 678 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 UNC5CO95185 931 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 CLDN9O95484 217 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 ABHD2P08910 425 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 TNNI3P19429 210 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 PTX3P26022 381 aaPredicted RBP16.5■□□□□ 0.23
TPM4-206ENST00000587201 GPR143P51810 404 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 CCNG1P51959 295 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 SERTAD2Q14140 314 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 MAPKAPK3Q16644 382 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 TRMT10CQ7L0Y3 403 aaKnown RBP16.5■□□□□ 0.23
TPM4-206ENST00000587201 L3MBTL4Q8NA19 623 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 CDK15Q96Q40 435 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 VTI1BQ9UEU0 232 aa16.5■□□□□ 0.23
TPM4-206ENST00000587201 ZNF223Q9UK11 482 aaPredicted RBP16.5■□□□□ 0.23
TPM4-206ENST00000587201 POLEQ07864 2286 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 NBPF19A0A087WUL8 3843 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 PLPP1O14494 284 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 ZFAND5O76080 213 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 STSP08842 583 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 TRHRP34981 398 aaPredicted RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 HLCSP50747 726 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 NEK2P51955 445 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 PER3P56645 1201 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 ALDH6A1Q02252 535 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 ID2Q02363 134 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 SPTAN1Q13813 2472 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 ZRSR2Q15696 482 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 FJX1Q86VR8 437 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 ARMC10Q8N2F6 343 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 TMEM156Q8N614 296 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 OR52B6Q8NGF0 335 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 WDR20Q8TBZ3 569 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 TMEM125Q96AQ2 219 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 MTFMTQ96DP5 389 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 MRPL57Q9BQC6 102 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 MRPL46Q9H2W6 279 aaKnown RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 TRIM45Q9H8W5 580 aaPredicted RBP16.49■□□□□ 0.23
TPM4-206ENST00000587201 MS4A12Q9NXJ0 267 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 PCTPQ9UKL6 214 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 ICE1Q9Y2F5 2266 aa16.49■□□□□ 0.23
TPM4-206ENST00000587201 ZGRF1Q86YA3 2104 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 A0A1B0GUH1 482 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 ASPDHA6ND91 283 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 OR7A17O14581 309 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 RIPK2O43353 540 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 PRKNO60260 465 aaPredicted RBP16.48■□□□□ 0.23
TPM4-206ENST00000587201 ITGA10O75578 1167 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 MLYCDO95822 493 aa16.48■□□□□ 0.23
TPM4-206ENST00000587201 ARFIP1P53367 373 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms