RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GPR85P60893 370 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 ATP6V0D1P61421 351 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TFF3Q07654 80 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TBL3Q12788 808 aaKnown RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 STX4Q12846 297 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 PDIA2Q13087 525 aaKnown RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 TBCCQ15814 346 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 HYAL4Q2M3T9 481 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 GXYLT1Q4G148 440 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 XKR6Q5GH73 641 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 EMC4Q5J8M3 183 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 PAGE2BQ5JRK9 111 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 OPN5Q6U736 354 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 IL20RBQ6UXL0 311 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 RTL4Q6ZR62 310 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 GPSM1Q86YR5 675 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 ANKMY2Q8IV38 441 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 KLHL7Q8IXQ5 586 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TMEM52Q8NDY8 209 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 KCNC2Q96PR1 638 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 RASL10BQ96S79 203 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 FAM173AQ9BQD7 235 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 DEFB127Q9H1M4 99 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 COPS7BQ9H9Q2 264 aaPredicted RBP13.93□□□□□ -0.18
VAPA-209ENST00000585042 DEPPQ9NTK1 212 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 RNF6Q9Y252 685 aa13.93□□□□□ -0.18
VAPA-209ENST00000585042 PHF3Q92576 2039 aaKnown RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 A0A0G2JN53 185 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 SUSD5O60279 629 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PDE9AO76083 593 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 GLSO94925 669 aaPredicted RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 OR6B1O95007 311 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 HOXD4P09016 255 aaPredicted RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 MSX1P28360 303 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PPP2R1BP30154 601 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 HK2P52789 917 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PLGLB1Q02325 96 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PCDH1Q08174 1060 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PMPCAQ10713 525 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 E2F2Q14209 437 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 ZNF460Q14592 562 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 MPEG1Q2M385 716 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 C18orf21Q32NC0 220 aaPredicted RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 TMEM35AQ53FP2 167 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 SYT10Q6XYQ8 523 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 VN1R5Q7Z5H4 357 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 DMRTC2Q8IXT2 367 aaPredicted RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 C17orf53Q8N3J3 647 aaPredicted RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 FAM47BQ8NA70 645 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 BBOF1Q8ND07 529 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 UBE2E3Q969T4 207 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 IL1RL2Q9HB29 575 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 WWOXQ9NZC7 414 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 TNFRSF10DQ9UBN6 386 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 KCNN3Q9UGI6 736 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 PTBP2Q9UKA9 531 aaKnown RBP13.92□□□□□ -0.18
VAPA-209ENST00000585042 SPACA6W5XKT8 324 aa13.92□□□□□ -0.18
VAPA-209ENST00000585042 HCFC1P51610 2035 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 FIGNL2A6NMB9 653 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 CCDC166P0CW27 439 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 SERPINB1P30740 379 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 SOX3P41225 446 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 RNF4P78317 190 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 DOC2AQ14183 400 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 PDK4Q16654 411 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 CHSY3Q70JA7 882 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 CLYBLQ8N0X4 340 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 FAM109AQ8N4B1 249 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 PDPRQ8NCN5 879 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 MYRIPQ8NFW9 859 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 CDKL2Q92772 493 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 UBXN10Q96LJ8 280 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 F2RL3Q96RI0 385 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 TMEM79Q9BSE2 394 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 TTTY12Q9BZ98 90 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 SACM1LQ9NTJ5 587 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 TXNDC16Q9P2K2 825 aa13.91□□□□□ -0.18
VAPA-209ENST00000585042 MTO1Q9Y2Z2 717 aaKnown RBP13.91□□□□□ -0.18
VAPA-209ENST00000585042 C2CD3Q4AC94 2353 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 NCF1BA6NI72 391 aaPredicted RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 NCF1CA8MVU1 366 aaPredicted RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 EFCAB8A8MWE9 144 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 FAM47E-STBD1D6RA91 191 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 WWP2O00308 870 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 EIF3HO15372 352 aaKnown RBP eCLIP13.9□□□□□ -0.18
VAPA-209ENST00000585042 PRAMEF4O60810 478 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SCELO95171 688 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 NCF1P14598 390 aaPredicted RBP13.9□□□□□ -0.18
VAPA-209ENST00000585042 CD1EP15812 388 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 STMN1P16949 149 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 TNNI3P19429 210 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 ACVR2AP27037 513 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 CERS1P27544 350 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 HSPA7P48741 367 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 ARFIP1P53367 373 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 SLC10A1Q14973 349 aa13.9□□□□□ -0.18
VAPA-209ENST00000585042 FASTKD3Q14CZ7 662 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms