RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ZDHHC20Q5W0Z9 365 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 PRSS55Q6UWB4 352 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 STOX1Q6ZVD7 989 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 RAPH1Q70E73 1250 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 DNAJB7Q7Z6W7 309 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 ZNF589Q86UQ0 364 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 PIGZQ86VD9 579 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CCAR2Q8N163 923 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 CARNMT1Q8N4J0 409 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 DNAJC22Q8N4W6 341 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TEX9Q8N6V9 391 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 FRMD1Q8N878 549 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 POMGNT2Q8NAT1 580 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 APPL2Q8NEU8 664 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 OR2L2Q8NH16 312 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 GOT1L1Q8NHS2 421 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 GSDMBQ8TAX9 411 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 MGARPQ8TDB4 240 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 PIBF1Q8WXW3 757 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 POMGNT1Q8WZA1 660 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 DYRK2Q92630 601 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 SECISBP2LQ93073 1101 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 SNX21Q969T3 373 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CCDC34Q96HJ3 373 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 LRRC3BQ96PB8 259 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 SLC22A12Q96S37 553 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 DESI2Q9BSY9 194 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 FUCA2Q9BTY2 467 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 HGH1Q9BTY7 390 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 EDEM2Q9BV94 578 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 XPO4Q9C0E2 1151 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 TMEM117Q9H0C3 514 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TRPV4Q9HBA0 871 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 PDE7BQ9NP56 450 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 SLC35C2Q9NQQ7 365 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TBC1D13Q9NVG8 400 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 TMEM161AQ9NX61 479 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 EHD2Q9NZN4 543 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 MRPL15Q9P015 296 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 TMCC3Q9ULS5 477 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 CORO1CQ9ULV4 474 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 R3HDM2Q9Y2K5 976 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 KLF2Q9Y5W3 355 aaPredicted RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 KCNE2Q9Y6J6 123 aa2.34□□□□□ -2.03
VAPA-208ENST00000584796 NYNRINQ9P2P1 1898 aaKnown RBP2.34□□□□□ -2.03
VAPA-208ENST00000584796 CSMD2Q7Z408 3487 aa2.34□□□□□ -2.04
VAPA-208ENST00000584796 TDRD6O60522 2096 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 HIVEP1P15822 2718 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 MED13Q9UHV7 2174 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 IGHV3OR16-10A0A075B7F0 116 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 A0A0D9SFI3 127 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 A0A1W2PQ09 198 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 A8MXE2 369 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 MYO1GB0I1T2 1018 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 DDX39AO00148 427 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 SOCS3O14543 225 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 KLF11O14901 512 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CCL16O15467 120 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 RPS6KA5O75582 802 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SLU7O95391 586 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 C22orf31O95567 290 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CLDN1O95832 211 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 GPIP06744 558 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SPARCP09486 303 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 ZNF806P0C7X5 589 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 THEGLP0DJG4 465 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 HSPD1P10809 573 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 ACP2P11117 423 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 IFNAR1P17181 557 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 GJA1P17302 382 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 EFNA1P20827 205 aaPredicted RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 SAT1P21673 171 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 BCKDHBP21953 392 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 U2AF2P26368 475 aaKnown RBP eCLIP2.33□□□□□ -2.043e-7■■■□□ 16.3
VAPA-208ENST00000584796 CCND2P30279 289 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 RPS9P46781 194 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 ZNF131P52739 623 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 PRAMEP78395 509 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 COX10Q12887 443 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 AIMP2Q13155 320 aaKnown RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 CRYMQ14894 314 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 NECTIN1Q15223 517 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 NTRK2Q16620 822 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 UGCGQ16739 394 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 MEP1AQ16819 746 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 DCAF10Q5QP82 559 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SLC25A30Q5SVS4 291 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 NCEH1Q6PIU2 408 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CORO6Q6QEF8 472 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SARM1Q6SZW1 724 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 SLC24A5Q71RS6 500 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CATSPER4Q7RTX7 472 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 ZNF554Q86TJ5 538 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CCDC60Q8IWA6 550 aaPredicted RBP2.33□□□□□ -2.04
VAPA-208ENST00000584796 UNC45BQ8IWX7 931 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 CCDC170Q8IYT3 715 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 ADGRF2Q8IZF7 708 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 NUP93Q8N1F7 819 aa2.33□□□□□ -2.04
VAPA-208ENST00000584796 LRRC43Q8N309 656 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms