RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SNAPC1Q16533 368 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 DGUOKQ16854 277 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 DEFB110Q30KQ9 67 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 IQCHQ86VS3 1027 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 UCN3Q969E3 161 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 ASB16Q96NS5 453 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 C1QTNF7Q9BXJ2 289 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 NUAK2Q9H093 628 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 STARD5Q9NSY2 213 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 PSME2Q9UL46 239 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CCL27Q9Y4X3 112 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 H0YAE9 185 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 LILRB3O75022 631 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 PVRP15151 417 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RPL3P39023 403 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 DNASE1L3Q13609 305 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 IRF4Q15306 451 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 INAQ16352 499 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SYPL1Q16563 259 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 NDUFAF5Q5TEU4 345 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 PRR23CQ6ZRP0 262 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 BCDIN3DQ7Z5W3 292 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TECPR1Q7Z6L1 1165 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 C10orf53Q8N6V4 93 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 INSM2Q96T92 566 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SLC17A9Q9BYT1 436 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 MKRN2Q9H000 416 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CLN6Q9NWW5 311 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 MAT2BQ9NZL9 334 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SPATA7Q9P0W8 599 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 MKLN1Q9UL63 735 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SLC27A6Q9Y2P4 619 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 PCYT1BQ9Y5K3 369 aaPredicted RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 SPTBN2O15020 2390 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CCDC88CQ9P219 2028 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 A0A0C4DFX4 3053 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CPSF4LA6NMK7 179 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 H0YJX3 145 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 BTN3A3O00478 584 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RNGTTO60942 597 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 INPP1P49441 399 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 NFATC3Q12968 1075 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KCNC3Q14003 757 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TIGD6Q17RP2 521 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KHDRBS2Q5VWX1 349 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 KLHL35Q6PF15 583 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CAMKK1Q8N5S9 505 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TCEANCQ8N8B7 351 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 RAB2BQ8WUD1 216 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TESCQ96BS2 214 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TBX5Q99593 518 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
TOP3A-217ENST00000584582 MS4A12Q9NXJ0 267 aa10.78□□□□□ -0.68
TOP3A-217ENST00000584582 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 EFCAB9A8MZ26 197 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 CAPN5O15484 640 aaPredicted RBP10.77□□□□□ -0.68
TOP3A-217ENST00000584582 TLX2O43763 284 aaPredicted RBP10.77□□□□□ -0.68
TOP3A-217ENST00000584582 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.68
TOP3A-217ENST00000584582 IL1RNP18510 177 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 CERS1P27544 350 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 ST3GAL4Q11206 333 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 APOFQ13790 326 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 DUSP7Q16829 419 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 RBM48Q5RL73 367 aaKnown RBP10.77□□□□□ -0.68
TOP3A-217ENST00000584582 DEPDC1Q5TB30 811 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 SHFQ7M4L6 423 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 CCDC103Q8IW40 242 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 OXR1Q8N573 874 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 ZFAND2BQ8WV99 257 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 KLHL28Q9NXS3 571 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 WDR37Q9Y2I8 494 aa10.77□□□□□ -0.68
TOP3A-217ENST00000584582 NCOR1O75376 2440 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 DLGAP1O14490 977 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 MYL12BO14950 172 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 TBX1O43435 398 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 IGFBP1P08833 259 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 CCNYL3P0C7X3 344 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 RGS8P57771 180 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 RUNX1T1Q06455 604 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 SOWAHCQ53LP3 525 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 COLEC12Q5KU26 742 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 REEP3Q6NUK4 255 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 POMZP3Q6PJE2 187 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 ZC3H14Q6PJT7 736 aaKnown RBP10.77□□□□□ -0.69
TOP3A-217ENST00000584582 ZNF730Q6ZMV8 503 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 ZNF547Q8IVP9 402 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 CCL4L1Q8NHW4 92 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 NDNFQ8TB73 568 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 UBTD2Q8WUN7 234 aa10.77□□□□□ -0.69
TOP3A-217ENST00000584582 HDAC2Q92769 488 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms