RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 FANCFQ9NPI8 374 aa5.79□□□□□ -1.48
NUP85-221ENST00000583548 CHMP5Q9NZZ3 219 aa5.79□□□□□ -1.48
NUP85-221ENST00000583548 FETUBQ9UGM5 382 aa5.79□□□□□ -1.48
NUP85-221ENST00000583548 ANAPC5Q9UJX4 755 aa5.79□□□□□ -1.48
NUP85-221ENST00000583548 PTBP2Q9UKA9 531 aaKnown RBP5.79□□□□□ -1.48
NUP85-221ENST00000583548 MAPRE3Q9UPY8 281 aa5.79□□□□□ -1.48
NUP85-221ENST00000583548 NOTCH1P46531 2555 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 LOC100289279A0A1B0GTE1 492 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 A0A1W2PNV4 684 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 ANKRD33BA6NCL7 494 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 KRT87PA6NCN2 255 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 LRRC53A6NM62 1247 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 IQCF5A8MTL0 148 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 H0Y3Z8 333 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 PRMT5O14744 637 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 TMPRSS2O15393 492 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 KLF4O43474 513 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 CEP104O60308 925 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 TNFSF13O75888 250 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 STK10O94804 968 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 SNX4O95219 450 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 SLC16A8O95907 504 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 CSF3P09919 207 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 DANCRP0C864 163 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 PAMP19021 973 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 TBXA2RP21731 343 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 USF1P22415 310 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 CTNNA2P26232 953 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 CCKARP32238 428 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 TTPAP49638 278 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 CDK9P50750 372 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 RNF4P78317 190 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 LSM11P83369 360 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP85-221ENST00000583548 RGS1Q08116 209 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 ZNF791Q3KP31 576 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 FASTKD1Q53R41 847 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 PRAMEF20Q5VT98 475 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 CDKAL1Q5VV42 579 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 DENND5AQ6IQ26 1287 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 SHISA2Q6UWI4 295 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 DNAJC14Q6Y2X3 702 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 ADGRE4PQ86SQ3 457 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 LRRC6Q86X45 466 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 GRAMD2AQ8IUY3 354 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 TC2NQ8N9U0 490 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 ZNF740Q8NDX6 193 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 C7orf57Q8NEG2 295 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 OR14A16Q8NHC5 309 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 SMAP2Q8WU79 429 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 ZNF480Q8WV37 535 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 SLC44A1Q8WWI5 657 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 SPACA9Q96E40 222 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 C11orf24Q96F05 449 aaPredicted RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 PGM2Q96G03 612 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 PLPPR2Q96GM1 343 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 QKIQ96PU8 341 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP85-221ENST00000583548 MACROD1Q9BQ69 325 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.78□□□□□ -1.48
NUP85-221ENST00000583548 FAIMQ9NVQ4 179 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 DDX56Q9NY93 547 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 UVRAGQ9P2Y5 699 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 COPS7AQ9UBW8 275 aa5.78□□□□□ -1.48
NUP85-221ENST00000583548 RUVBL2Q9Y230 463 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 MRPS33Q9Y291 106 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 ANK3Q12955 4377 aaKnown RBP5.78□□□□□ -1.48
NUP85-221ENST00000583548 CCDC162PA2VCL2 907 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 MROH6A6NGR9 719 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 OR51F1A6NGY5 319 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 EIF3FO00303 357 aaPredicted RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 NDUFS4O43181 175 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 CDH16O75309 829 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 PSIP1O75475 530 aaKnown RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 ZNF189O75820 626 aaPredicted RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 ACSL3O95573 720 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 FTCDO95954 541 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 GAS8O95995 478 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 PLAUP00749 431 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 KRT1P04264 644 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 IFNA16P05015 189 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 SOD3P08294 240 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 CD8BP10966 210 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 SERPINB3P29508 390 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 GMPRP36959 345 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 SRP14P37108 136 aaKnown RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 SLCO1A2P46721 670 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 MASP1P48740 699 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 OLR1P78380 273 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 SLC13A2Q13183 592 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 POU6F1Q14863 301 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 TOMM20Q15388 145 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 RPS6KA1Q15418 735 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 DPCR1Q3MIW9 517 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 PIGGQ5H8A4 983 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 ADGRD1Q6QNK2 874 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 ZNF474Q6S9Z5 364 aaPredicted RBP5.77□□□□□ -1.49
NUP85-221ENST00000583548 PACS2Q86VP3 889 aa5.77□□□□□ -1.49
NUP85-221ENST00000583548 SCUBE1Q8IWY4 988 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms