RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 VMP1Q96GC9 406 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 QRFPRQ96P65 431 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 CDK15Q96Q40 435 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 MAPKAP1Q9BPZ7 522 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 SORBS1Q9BX66 1292 aaKnown RBP7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ALOXE3Q9BYJ1 711 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 TSPAN10Q9H1Z9 355 aaPredicted RBP7.4□□□□□ -1.22
PRKCA-204ENST00000583361 NOL11Q9H8H0 719 aaKnown RBP7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ADAP2Q9NPF8 381 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 DMRT3Q9NQL9 472 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 SEC14L3Q9UDX4 400 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 TBK1Q9UHD2 729 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ADGRE2Q9UHX3 823 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ERRFI1Q9UJM3 462 aaPredicted RBP7.4□□□□□ -1.22
PRKCA-204ENST00000583361 TMCO1Q9UM00 188 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ERVK-11Q9UQG0 969 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 RNF11Q9Y3C5 154 aa7.4□□□□□ -1.22
PRKCA-204ENST00000583361 ZNF407Q9C0G0 2248 aa7.4□□□□□ -1.23
PRKCA-204ENST00000583361 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 IGKV3D-11A0A0A0MRZ8 115 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 IQANK1A0A1B0GTG1 560 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ARHGAP10A1A4S6 786 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CCDC189A1A4V9 331 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CLEC18AA5D8T8 446 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SYNDIG1LA6NDD5 238 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 C17orf105B2RV13 164 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 E2F3O00716 465 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 LRRTM2O43300 516 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DYRK3O43781 588 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CTNSO60931 367 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ITGA10O75578 1167 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SLC25A12O75746 678 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CLDN9O95484 217 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DDAH2O95865 285 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SP1P08047 785 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 COL6A2P12110 1019 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 GP1BBP13224 206 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 TAC1P20366 129 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 PTX3P26022 381 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ECHS1P30084 290 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 TLX1P31314 330 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 BUD31P41223 144 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CASP6P55212 293 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 IFT88Q13099 833 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SERTAD2Q14140 314 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 PCBP2Q15366 365 aaKnown RBP eCLIP7.39□□□□□ -1.232e-7■□□□□ 8.9
PRKCA-204ENST00000583361 ZRSR2Q15696 482 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ELAVL1Q15717 326 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 C4orf17Q53FE4 359 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SGO1Q5FBB7 561 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DEPDC1Q5TB30 811 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 C1QL3Q5VWW1 255 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SLC25A25Q6KCM7 469 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CLEC18BQ6UXF7 455 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ZNF793Q6ZN11 406 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 RPS27LQ71UM5 84 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 TRMT10CQ7L0Y3 403 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 FJX1Q86VR8 437 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SCUBE1Q8IWY4 988 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 OR4N5Q8IXE1 308 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CYP4Z2PQ8N1L4 340 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 CLEC18CQ8NCF0 446 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DNAJB8Q8NHS0 232 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 UBLCP1Q8WVY7 318 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DAZLQ92904 295 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 DGAT2Q96PD7 388 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 TAAR6Q96RI8 345 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 NPAS2Q99743 824 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 FUT8Q9BYC5 575 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 OR8D2Q9GZM6 311 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 MRPL46Q9H2W6 279 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 LIN28AQ9H9Z2 209 aaKnown RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 WDR41Q9HAD4 459 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 LYRM4Q9HD34 91 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SEMA4BQ9NPR2 832 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 COPS7AQ9UBW8 275 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 PLEKHB1Q9UF11 243 aaPredicted RBP7.39□□□□□ -1.23
PRKCA-204ENST00000583361 PHF11Q9UIL8 331 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 ZNF180Q9UJW8 692 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 EXPH5Q8NEV8 1989 aa7.39□□□□□ -1.23
PRKCA-204ENST00000583361 SMIM23A6NLE4 172 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 A8MVJ9 347 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 NPIPA5E9PKD4 350 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 STX16-NPEPL1H3BU86 382 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 TGFBR3LH3BV60 316 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 GOLGA8RI6L899 631 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 WWP2O00308 870 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 CYR61O00622 381 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 PLPP1O14494 284 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 STX16O14662 325 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 RIPK2O43353 540 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 KLK8O60259 260 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 OR10H2O60403 315 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 UGDHO60701 494 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 PRKRAO75569 313 aaKnown RBP7.38□□□□□ -1.23
PRKCA-204ENST00000583361 ZFAND5O76080 213 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 GBAP04062 536 aa7.38□□□□□ -1.23
PRKCA-204ENST00000583361 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms