RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	RBMY1C	P0DJD4	496 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	PSMB1	P20618	241 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	PTN	P21246	168 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	BRD2	P25440	801 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ADH6	P28332	368 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GTF2H1	P32780	548 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	HSPA9	P38646	679 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	PPP1R2	P41236	205 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CD86	P42081	329 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	KIR2DL2	P43627	348 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	RFX3	P48380	749 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GYS2	P54840	703 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	AMPD3	Q01432	767 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	PPP3CA	Q08209	521 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GTF2H3	Q13889	308 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	KRT33B	Q14525	404 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GUSBP1	Q15486	140 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MAN2A1	Q16706	1144 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC25A52	Q3SY17	297 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC122	Q5T0U0	273 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF544	Q6NX49	715 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	UNC5A	Q6ZN44	842 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF771	Q7L3S4	317 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CTAGE6	Q86UF2	777 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CNTN4	Q8IWV2	1026 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CTAGE4	Q8IX94	777 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC170	Q8IYT3	715 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FBXL14	Q8N1E6	418 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	APCDD1L	Q8NCL9	501 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	NFAM1	Q8NET5	270 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	OR2L2	Q8NH16	312 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	UHMK1	Q8TAS1	419 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	PAQR8	Q8TEZ7	354 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SEMA4D	Q92854	862 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC47	Q96A33	483 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	LINC00615	Q96LM1	132 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	GNRHR2	Q96P88	292 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SORCS2	Q96PQ0	1159 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SPATA16	Q9BXB7	569 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ALOXE3	Q9BYJ1	711 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	DEFB126	Q9BYW3	111 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	NDST4	Q9H3R1	872 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	HAUS4	Q9H6D7	363 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FBXO34	Q9NWN3	711 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	SMARCAL1	Q9NZC9	954 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MRPL15	Q9P015	296 aa	Known RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	MYO1A	Q9UBC5	1043 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FETUB	Q9UGM5	382 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	ADAMTS6	Q9UKP5	1117 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	TMPRSS11E	Q9UL52	423 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	BOK	Q9UMX3	212 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM169A	Q9Y6X4	670 aa		4.38	□□□□□ -1.71
MSI2-216	ENST00000582772	FLG2	Q5D862	2391 aa	Predicted RBP	4.38	□□□□□ -1.71
MSI2-216	ENST00000582772		A0A0G2JMP0	313 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772		A0A0X1KG70	313 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772		A0A1B0GVY2	172 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	MACROD2	A1Z1Q3	448 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SAGE2P	A6NJ88	616 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC53	A6NM62	1247 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TARM1	B6A8C7	271 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM72C	H0Y354	149 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	P2RX6	O15547	441 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FOXS1	O43638	330 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RAMP1	O60894	148 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	GRAP2	O75791	330 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	OR6B1	O95007	311 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FKBP9	O95302	570 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TF	P02787	698 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PDHA1	P08559	390 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PGC	P20142	388 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	CA4	P22748	312 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TBXAS1	P24557	533 aa	Predicted RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	IL1R2	P27930	398 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PCK1	P35558	622 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	GCLM	P48507	274 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	CD151	P48509	253 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TRPC1	P48995	793 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SULT1E1	P49888	294 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	MEF2A	Q02078	507 aa	Predicted RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RHAG	Q02094	409 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TNFRSF17	Q02223	184 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	C2orf54	Q08AI8	447 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TBL3	Q12788	808 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RIN1	Q13671	783 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	BOP1	Q14137	746 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM53B	Q14153	422 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ABRAXAS2	Q15018	415 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	IFI16	Q16666	785 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SYT16	Q17RD7	645 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	MINDY4	Q4G0A6	757 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM72A	Q5TYM5	149 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	KRT39	Q6A163	491 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FRMPD2B	Q6IN97	320 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM72D	Q6L9T8	149 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PPP4R4	Q6NUP7	873 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RNF44	Q7L0R7	432 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RRAGA	Q7L523	313 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms