RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 CMTM7Q96FZ5 175 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 ZNF354BQ96LW1 612 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SLX1AQ9BQ83 275 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 TBCDQ9BTW9 1192 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 SLC29A3Q9BZD2 475 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 RNF32Q9H0A6 362 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 MRPL46Q9H2W6 279 aaKnown RBP11.74□□□□□ -0.53
CBX1-206ENST00000581003 ANKZF1Q9H8Y5 726 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 CLK4Q9HAZ1 481 aaKnown RBP11.74□□□□□ -0.53
CBX1-206ENST00000581003 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 EMCNQ9ULC0 261 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 ATG4BQ9Y4P1 393 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 MMACHCQ9Y4U1 282 aa11.74□□□□□ -0.53
CBX1-206ENST00000581003 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
CBX1-206ENST00000581003 A1L4Q6 167 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TMEM200CA6NKL6 621 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 H0YIV9 168 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 STX16O14662 325 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 DLX3O60479 287 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 SMIM24O75264 130 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 FLNBO75369 2602 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 CLDN9O95484 217 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 RBP1P09455 135 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 PYGBP11216 843 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 CNTFP26441 200 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 BSGP35613 385 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 GPR143P51810 404 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 RAP1GDS1P52306 607 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 HSD17B7P56937 341 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 OC90Q02509 493 aaPredicted RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 MEP1AQ16819 746 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TSNAXIP1Q2TAA8 658 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TMEM35AQ53FP2 167 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 ZNF766Q5HY98 468 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 FHL5Q5TD97 284 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 LIPJQ5W064 366 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TIFABQ6ZNK6 161 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 RPS19BP1Q86WX3 136 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 ZNF595Q8IYB9 648 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 MMP21Q8N119 569 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 SLC5A8Q8N695 610 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 B3GNT7Q8NFL0 401 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 EPS8L3Q8TE67 593 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 PTPMT1Q8WUK0 201 aaPredicted RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 UBE2E3Q969T4 207 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 PPWD1Q96BP3 646 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 PSMG3-AS1Q96PY0 264 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 MRPL57Q9BQC6 102 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 LYRM4Q9HD34 91 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 OLAHQ9NV23 265 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TEKT2Q9UIF3 430 aa11.73□□□□□ -0.53
CBX1-206ENST00000581003 TNPO3Q9Y5L0 923 aaKnown RBP11.73□□□□□ -0.53
CBX1-206ENST00000581003 A0A088AWK7 358 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 A0A0A6YYD5 115 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 A0A1W2PR48 441 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ZNF354AO60765 605 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 CTNSO60931 367 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 DDAH2O95865 285 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 IFNA16P05015 189 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 COL6A2P12110 1019 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ZNF10P21506 573 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 CPN2P22792 545 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 PIK3CBP42338 1070 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 CCNG1P51959 295 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 MLF1P58340 268 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 TGM3Q08188 693 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 AP5B1Q2VPB7 878 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 RPUSD3Q6P087 351 aaKnown RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 CHSY3Q70JA7 882 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 OR2W6PQ8NHA6 318 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 ATP6V1E2Q96A05 226 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 RGMAQ96B86 450 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 UTP23Q9BRU9 249 aaKnown RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 MRPL1Q9BYD6 325 aaKnown RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 ALOXE3Q9BYJ1 711 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 DEFB126Q9BYW3 111 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ADAP2Q9NPF8 381 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 AGPAT4Q9NRZ5 378 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 TEX10Q9NXF1 929 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 PSMC3IPQ9P2W1 217 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
CBX1-206ENST00000581003 OSGIN2Q9Y236 505 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 ASB4Q9Y574 426 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 PCDHGA11Q9Y5H2 935 aa11.72□□□□□ -0.53
CBX1-206ENST00000581003 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
CBX1-206ENST00000581003 CLDN4O14493 209 aa11.71□□□□□ -0.53
CBX1-206ENST00000581003 OR4F21O95013 312 aa11.71□□□□□ -0.53
CBX1-206ENST00000581003 RASAL1O95294 804 aa11.71□□□□□ -0.53
CBX1-206ENST00000581003 AIFM1O95831 613 aa11.71□□□□□ -0.53
CBX1-206ENST00000581003 CHN1P15882 459 aa11.71□□□□□ -0.53
CBX1-206ENST00000581003 SERPINB1P30740 379 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms