RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 SLC25A12O75746 678 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 TAC1P20366 129 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 TPP2P29144 1249 aaPredicted RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 MLF1P58340 268 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 ALDH6A1Q02252 535 aaKnown RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 SRSF11Q05519 484 aaKnown RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 CPSF6Q16630 551 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMG8-204ENST00000580498 CYP20A1Q6UW02 462 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 ZGRF1Q86YA3 2104 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 KIF2BQ8N4N8 673 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 MORN4Q8NDC4 146 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 MDS2Q8NDY4 140 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 UHMK1Q8TAS1 419 aaKnown RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 PHF21BQ96EK2 531 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 TAAR6Q96RI8 345 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 MTERF1Q99551 399 aaKnown RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 ALOXE3Q9BYJ1 711 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 MRPL46Q9H2W6 279 aaKnown RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 OR51B5Q9H339 312 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 DMRT3Q9NQL9 472 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 AHSPQ9NZD4 102 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 XPR1Q9UBH6 696 aa18.81■□□□□ 0.6
SMG8-204ENST00000580498 PLEKHB1Q9UF11 243 aaPredicted RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 ERRFI1Q9UJM3 462 aaPredicted RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 KLF13Q9Y2Y9 288 aaPredicted RBP18.81■□□□□ 0.6
SMG8-204ENST00000580498 SPTBN1Q01082 2364 aaKnown RBP18.8■□□□□ 0.6
SMG8-204ENST00000580498 CYR61O00622 381 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SH3BGRLO75368 114 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SCELO95171 688 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SP1P08047 785 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 HLCSP50747 726 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 IFT88Q13099 833 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SLAMF1Q13291 335 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 KRTCAP3Q53RY4 240 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SPINK14Q6IE38 97 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 ADNP2Q6IQ32 1131 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 MTFR2Q6P444 385 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 LCA5Q86VQ0 697 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 NFAM1Q8NET5 270 aaPredicted RBP18.8■□□□□ 0.6
SMG8-204ENST00000580498 NCLNQ969V3 563 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SCMH1Q96GD3 660 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 ART5Q96L15 291 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SIGLEC12Q96PQ1 595 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 SERPINI1Q99574 410 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 PELOQ9BRX2 385 aaKnown RBP18.8■□□□□ 0.6
SMG8-204ENST00000580498 LYARQ9NX58 379 aaKnown RBP18.8■□□□□ 0.6
SMG8-204ENST00000580498 HIVEP3Q5T1R4 2406 aa18.8■□□□□ 0.6
SMG8-204ENST00000580498 KLRC4-KLRK1H3BQV0 150 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 SAP18O00422 153 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 LRRTM2O43300 516 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 UNC5CO95185 931 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 RHOXF2BP0C7M4 288 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 TRHRP34981 398 aaPredicted RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 MAGEA12P43365 314 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 SSR4P51571 173 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 PLIN5Q00G26 463 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 CUL3Q13618 768 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 ZNF324BQ6AW86 544 aaPredicted RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 HSDL2Q6YN16 418 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 GALNTL5Q7Z4T8 443 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 GPR180Q86V85 440 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 GPALPP1Q8IXQ4 340 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 ZCCHC7Q8N3Z6 543 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 POGLUT1Q8NBL1 392 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 OR5L2Q8NGL0 311 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 TANKQ92844 425 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 RBM18Q96H35 190 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 MAGED4Q96JG8 741 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 GPR78Q96P69 363 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 DGAT2Q96PD7 388 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 CSF3RQ99062 836 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 MAPKAP1Q9BPZ7 522 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 RHOXF2Q9BQY4 288 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 NOL11Q9H8H0 719 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.79■□□□□ 0.6
SMG8-204ENST00000580498 PSD3Q9NYI0 1048 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 VTI1BQ9UEU0 232 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 PPIEQ9UNP9 301 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 ERVK-11Q9UQG0 969 aa18.79■□□□□ 0.6
SMG8-204ENST00000580498 YARS2Q9Y2Z4 477 aaKnown RBP18.79■□□□□ 0.6
SMG8-204ENST00000580498 ARHGAP10A1A4S6 786 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 C17orf105B2RV13 164 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 FOXE1O00358 373 aaPredicted RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 RTCAO00442 366 aaKnown RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 TBX6O95947 436 aaPredicted RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 OTCP00480 354 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 LDLRP01130 860 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 STSP08842 583 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 ECHS1P30084 290 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 RPS13P62277 151 aaKnown RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 ZRSR2Q15696 482 aaKnown RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 TEX35Q5T0J7 233 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 ZNF793Q6ZN11 406 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 PAGE2Q7Z2X7 111 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 MAMDC2Q7Z304 686 aaPredicted RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 NUDT13Q86X67 352 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 CYP4Z2PQ8N1L4 340 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 PLD6Q8N2A8 252 aaKnown RBP18.78■□□□□ 0.6
SMG8-204ENST00000580498 L3MBTL4Q8NA19 623 aa18.78■□□□□ 0.6
SMG8-204ENST00000580498 APCDD1LQ8NCL9 501 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms