RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 XKR7Q5GH72 579 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 XKR6Q5GH73 641 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ARL13AQ5H913 290 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZC3H12BQ5HYM0 836 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TCTE1Q5JU00 501 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 DCAF12Q5T6F0 453 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 THEMIS2Q5TEJ8 643 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM69BQ5VUD6 431 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 GARNL3Q5VVW2 1013 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LIPJQ5W064 366 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 KANK2Q63ZY3 851 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MRM1Q6IN84 353 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TLDC1Q6P9B6 456 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ABHD17CQ6PCB6 329 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 FAM199XQ6PEV8 388 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TMIGD1Q6UXZ0 262 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CEACAM20Q6UY09 585 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 Q6ZSR9 355 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MAVSQ7Z434 540 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ASPGQ86U10 573 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PPP1R3BQ86XI6 285 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC22A9Q8IVM8 553 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZC3H7AQ8IWR0 971 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF655Q8N720 491 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CSNK1A1LQ8N752 337 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 AMER2Q8N7J2 671 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SNX31Q8N9S9 440 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM52Q8NDY8 209 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 OR2T11Q8NH01 316 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 HUS1BQ8NHY5 278 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PROKR1Q8TCW9 393 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 UTP15Q8TED0 518 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TRPC4APQ8TEL6 797 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CT55Q8WUE5 264 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 DVL3Q92997 716 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CCDC126Q96EE4 140 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MVB12AQ96EY5 273 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SEC16BQ96JE7 1060 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SCYL1Q96KG9 808 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TEFMQ96QE5 360 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SMC6Q96SB8 1091 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SELENOSQ9BQE4 189 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 AIF1LQ9BQI0 150 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ZPBPQ9BS86 351 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CAPS2Q9BXY5 557 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC29A3Q9BZD2 475 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ASPSCR1Q9BZE9 553 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ACPTQ9BZG2 426 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 DRC3Q9H069 523 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 MLXIPLQ9NP71 852 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SEMA4BQ9NPR2 832 aaPredicted RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 LANCL2Q9NS86 450 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CUTCQ9NTM9 273 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 ABCF3Q9NUQ8 709 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 GPATCH2Q9NW75 528 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SOHLH2Q9NX45 425 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PSD3Q9NYI0 1048 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 KCMF1Q9P0J7 381 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 DHCR7Q9UBM7 475 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 IL17BQ9UHF5 180 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 RARRES3Q9UL19 164 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 EXO1Q9UQ84 846 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PCDHGA6Q9Y5G7 932 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 TNPO3Q9Y5L0 923 aaKnown RBP3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PTGDR2Q9Y5Y4 395 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 SLC22A7Q9Y694 548 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 HEATR5AQ86XA9 2040 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 CNTRLQ7Z7A1 2325 aa3.58□□□□□ -1.84
SMARCE1-215ENST00000578995 PIEZO2Q9H5I5 2752 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 IGKV3D-11A0A0A0MRZ8 115 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A0A6YYC8 382 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 A0A0A6YYD5 115 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TMEM8BA6NDV4 472 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 HMGB1P1B2RPK0 211 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 H0YIG0 161 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 STMND1H3BQB6 276 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 I3L1I5 382 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RTCAO00442 366 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MANBAO00462 879 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 KLF11O14901 512 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CLGNO14967 610 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 GPR42O15529 346 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 NDUFS4O43181 175 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ATP8B1O43520 1251 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OR1F1O43749 312 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 TMPRSS11DO60235 418 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 KATNA1O75449 491 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 EEDO75530 441 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 MPDZO75970 2070 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SUPT7LO94864 414 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 SEMA3DO95025 777 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 CLDN9O95484 217 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 OTCP00480 354 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 PDYNP01213 254 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 S100BP04271 92 aaPredicted RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ENO1P06733 434 aaKnown RBP3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 RAB40ALP0C0E4 278 aa3.57□□□□□ -1.84
SMARCE1-215ENST00000578995 ZNF888P0CJ79 500 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms