RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RMND5AQ9H871 391 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 SLC7A8Q9UHI5 535 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 WDR37Q9Y2I8 494 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 TSC22D4Q9Y3Q8 395 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 CSMD1Q96PZ7 3565 aa9.67□□□□□ -0.86
SS18-210ENST00000578700 KIR2DS5A0A0G2JLQ3 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 A0A0G2JNG1 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 GNG14A0A1W2PPG7 69 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 ARGFXA6NJG6 315 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 OR52A4PA6NMU1 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 KIR2DS3K7RE56 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 FBP2O00757 339 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 KIF1CO43896 1103 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 PRMT3O60678 531 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 FKBP6O75344 327 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 PDE5AO76074 875 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 UBXN7O94888 489 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 VIPP01282 170 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 BCKDHAP12694 445 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 F3P13726 295 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 DDX5P17844 614 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 CAPN3P20807 821 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 PRPS1L1P21108 318 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 PKLRP30613 574 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 HPCAL1P37235 193 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 RPL3P39023 403 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 PGDP52209 483 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 CLDN8P56748 225 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 RPS18P62269 152 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 AP2B1P63010 937 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 KIR2DS5Q14953 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 KPNB1Q14974 876 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 PLCL1Q15111 1095 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 TIGD2Q4W5G0 525 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 ICE2Q659A1 982 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 CPZQ66K79 652 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 NOXRED1Q6NXP6 359 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 PGM2L1Q6PCE3 622 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 FAM199XQ6PEV8 388 aaPredicted RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 RIPOR1Q6ZS17 1223 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 FAM92BQ6ZTR7 304 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 C2orf73Q8N5S3 287 aaPredicted RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 AVL9Q8NBF6 648 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 TTLQ8NG68 377 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 HUS1BQ8NHY5 278 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 CT55Q8WUE5 264 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SLC13A3Q8WWT9 602 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 CCDC124Q96CT7 223 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 CLPTM1LQ96KA5 538 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SH3GL1Q99961 368 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 TRIM15Q9C019 465 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SRMSQ9H3Y6 488 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 NT5DC2Q9H857 520 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SLAMF7Q9NQ25 335 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 LHX9Q9NQ69 397 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SIDT1Q9NXL6 827 aaKnown RBP9.66□□□□□ -0.86
SS18-210ENST00000578700 OR6C2Q9NZP2 312 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 SRPK3Q9UPE1 567 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 MAP4K5Q9Y4K4 846 aa9.66□□□□□ -0.86
SS18-210ENST00000578700 ARHGAP10A1A4S6 786 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 A8MUI8 341 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 MAGEB17A8MXT2 336 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 ENTPD5O75356 428 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 KCNH1O95259 989 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 ANXA4P09525 319 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 CD22P20273 847 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 GSTM2P28161 218 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 S100A3P33764 101 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 ACTR3P61158 418 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 RPS13P62277 151 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 SRSF11Q05519 484 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 PRDX1Q06830 199 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 LRRC74AQ0VAA2 488 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 FLOT2Q14254 428 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 IL11RAQ14626 422 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 PTGR1Q14914 329 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 INPP5JQ15735 1006 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 MAPKAPK3Q16644 382 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 PRR30Q53SZ7 412 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 FAM219BQ5XKK7 198 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 IRGCQ6NXR0 463 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 PAGE2Q7Z2X7 111 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 AMIGO1Q86WK6 493 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 PPP1R3BQ86XI6 285 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 HPS6Q86YV9 775 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 RBM12BQ8IXT5 1001 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 VPS37AQ8NEZ2 397 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 ABHD11Q8NFV4 315 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 VPS33AQ96AX1 596 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 EPB41L1Q9H4G0 881 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 ACTL8Q9H568 366 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 XKR8Q9H6D3 395 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 AKIRIN1Q9H9L7 192 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 IL1RL2Q9HB29 575 aa9.65□□□□□ -0.86
SS18-210ENST00000578700 MRPS30Q9NP92 439 aaKnown RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 CUEDC1Q9NWM3 386 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 SCHIP1Q9P0W5 487 aaPredicted RBP9.65□□□□□ -0.86
SS18-210ENST00000578700 PPT2Q9UMR5 302 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms