RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ACSM2BQ68CK6 577 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 NXNQ6DKJ4 435 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 TRIM40Q6P9F5 258 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ABHD13Q7L211 337 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 MTDHQ86UE4 582 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 SLCO6A1Q86UG4 719 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZCCHC7Q8N3Z6 543 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 BMPERQ8N8U9 685 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 KCT2Q8NC54 265 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 DEFB124Q8NES8 71 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 UTP15Q8TED0 518 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 MVB12AQ96EY5 273 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 LRRC37BQ96QE4 947 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 CMKLR1Q99788 373 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 MRPL1Q9BYD6 325 aaKnown RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 MYLK2Q9H1R3 596 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 KLHL31Q9H511 634 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZNF385DQ9H6B1 395 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FANCEQ9HB96 536 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 LHX9Q9NQ69 397 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 SAR1AQ9NR31 198 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 FBXO8Q9NRD0 319 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 AKAP7Q9P0M2 348 aaPredicted RBP7.6□□□□□ -1.19
COPS3-215ENST00000578317 MCM8Q9UJA3 840 aa7.6□□□□□ -1.19
COPS3-215ENST00000578317 ANKRD12Q6UB98 2062 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 RALGAPA1Q6GYQ0 2036 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 HYKKA2RU49 373 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 E9PBE3 544 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 P2RX6O15547 441 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ERI3O43414 337 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 KLHL41O60662 606 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 OR2B3O76000 313 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 KLHL18O94889 574 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 MT-CO3P00414 261 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 EIF2S1P05198 315 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 SERPIND1P05546 499 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 FGF5P12034 268 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 BCKDHAP12694 445 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ATP5A1P25705 553 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 COL8A1P27658 744 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 TIA1P31483 386 aaKnown RBP eCLIP7.59□□□□□ -1.19
COPS3-215ENST00000578317 NTF4P34130 210 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ARSFP54793 590 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 DIO3P55073 304 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ITGA1P56199 1179 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 C21orf58P58505 322 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 SKP1P63208 163 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 RAE1P78406 368 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 MC2RQ01718 297 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 SF3A3Q12874 501 aaKnown RBP eCLIP7.59□□□□□ -1.19
COPS3-215ENST00000578317 EIF3IQ13347 325 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 KCNAB1Q14722 419 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 C16orf72Q14CZ0 275 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 MUM1Q2TAK8 710 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 HKDC1Q2TB90 917 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 GALNTL6Q49A17 601 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 PDCD4Q53EL6 469 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 PHF19Q5T6S3 580 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 TMEM198Q66K66 360 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 MED25Q71SY5 747 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 COMMD6Q7Z4G1 85 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 CLNKQ7Z7G1 428 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 B3GNT8Q7Z7M8 397 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ALYREFQ86V81 257 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 TMPRSS12Q86WS5 348 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 KIAA2013Q8IYS2 634 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 GPR135Q8IZ08 494 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 C1orf52Q8N6N3 182 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 RCBTB1Q8NDN9 531 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 OR1L3Q8NH93 324 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 N4BP2L2Q92802 583 aaPredicted RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 LIN37Q96GY3 246 aaPredicted RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 SERINC2Q96SA4 455 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 MACROD1Q9BQ69 325 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 NPLQ9BXD5 320 aaPredicted RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 TMPRSS13Q9BYE2 586 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 STRADBQ9C0K7 418 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 SPRTNQ9H040 489 aaPredicted RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 AIG1Q9NVV5 245 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 ZIM2Q9NZV7 527 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 SUCOQ9UBS9 1254 aaKnown RBP7.59□□□□□ -1.19
COPS3-215ENST00000578317 MAPRE3Q9UPY8 281 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 PIEZO1Q92508 2521 aa7.59□□□□□ -1.19
COPS3-215ENST00000578317 RP1P56715 2156 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 A0A0A6YYD5 115 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 TMEM150CB9EJG8 249 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 H0YIG0 161 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 SAP18O00422 153 aaKnown RBP7.58□□□□□ -1.2
COPS3-215ENST00000578317 ANKRD28O15084 1053 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 GALR3O60755 368 aaPredicted RBP7.58□□□□□ -1.2
COPS3-215ENST00000578317 GUCY1B2O75343 617 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 NSA2O95478 260 aaKnown RBP7.58□□□□□ -1.2
COPS3-215ENST00000578317 ONECUT2O95948 504 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 KLK1P06870 262 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 ANXA4P09525 319 aaPredicted RBP7.58□□□□□ -1.2
COPS3-215ENST00000578317 FTH1P19P0C7X4 201 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 G6PDP11413 515 aa7.58□□□□□ -1.2
COPS3-215ENST00000578317 NCF2P19878 526 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms