RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TSPAN8P19075 237 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 RAB38P57729 211 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 RPS13P62277 151 aaKnown RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 CUL3Q13618 768 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 RUNX2Q13950 521 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 PCOLCEQ15113 449 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ABHD17BQ5VST6 288 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF793Q6ZN11 406 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 LANCL3Q6ZV70 420 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 CHSY3Q70JA7 882 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 MILR1Q7Z6M3 343 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 SIRT6Q8N6T7 355 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 BANPQ8N9N5 519 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 PLPP5Q8NEB5 264 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF700Q9H0M5 742 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 OR51B5Q9H339 312 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 C12orf65Q9H3J6 166 aaKnown RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 GSTO2Q9H4Y5 243 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 COPS7BQ9H9Q2 264 aaPredicted RBP11.99□□□□□ -0.49
CCDC57-211ENST00000578187 TRPS1Q9UHF7 1281 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF225Q9UK10 706 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 DAPP1Q9UN19 280 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 OSGIN2Q9Y236 505 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 STK38LQ9Y2H1 464 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 NTNG1Q9Y2I2 539 aa11.99□□□□□ -0.49
CCDC57-211ENST00000578187 ESPL1Q14674 2120 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 IGKV3D-11A0A0A0MRZ8 115 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 A0A1B0GUH1 482 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 CCDC151A5D8V7 595 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 OR2W5A6NFC9 320 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 PSMD12O00232 456 aaPredicted RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 RTCAO00442 366 aaKnown RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 PLPP1O14494 284 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 SEMA3DO95025 777 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ETHE1O95571 254 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 MLYCDO95822 493 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 RNF224P0DH78 156 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 HIST1H1TP22492 207 aaPredicted RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 PTX3P26022 381 aaPredicted RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 TNFSF10P50591 281 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 LIM2P55344 173 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 DNAJB13P59910 316 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 NAA20P61599 178 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 LCP2Q13094 533 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 PCLAFQ15004 111 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ABRAXAS2Q15018 415 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 KRT71Q3SY84 523 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 FRG2Q64ET8 278 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 HIST2H2BCQ6DN03 193 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 CPEB2Q7Z5Q1 589 aaKnown RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ANKRD37Q7Z713 158 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 SRRM1Q8IYB3 904 aaKnown RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 TRPC4APQ8TEL6 797 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 HAS2Q92819 552 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 TSLPQ969D9 159 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ZIM3Q96PE6 472 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 FRG2BQ96QU4 278 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
CCDC57-211ENST00000578187 LYRM4Q9HD34 91 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 OXSMQ9NWU1 459 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 SENP1Q9P0U3 644 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 ABI3Q9P2A4 366 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 MID2Q9UJV3 735 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 PLLPQ9Y342 182 aa11.98□□□□□ -0.49
CCDC57-211ENST00000578187 FAM227AF5H4B4 570 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SAP18O00422 153 aaKnown RBP11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CYR61O00622 381 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 LRRTM2O43300 516 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 B4GALT2O60909 372 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SH3BGRLO75368 114 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 ERLIN1O75477 346 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 OR4F21O95013 312 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CRYABP02511 175 aaKnown RBP11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CPA3P15088 417 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SOX11P35716 441 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SSR2P43308 183 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 NEK2P51955 445 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 RAP1GDS1P52306 607 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 PKNOX1P55347 436 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 ZNF33BQ06732 778 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 IFT88Q13099 833 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 AP5B1Q2VPB7 878 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 FRMD7Q6ZUT3 714 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 GPRIN3Q6ZVF9 776 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SCUBE1Q8IWY4 988 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 ZCCHC7Q8N3Z6 543 aaKnown RBP11.97□□□□□ -0.49
CCDC57-211ENST00000578187 ACOT4Q8N9L9 421 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 TMEM52Q8NDY8 209 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CATSPER1Q8NEC5 780 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 AGAP11Q8TF27 550 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 RGMAQ96B86 450 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SMC6Q96SB8 1091 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CSF3RQ99062 836 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 CENPKQ9BS16 269 aa11.97□□□□□ -0.49
CCDC57-211ENST00000578187 IQCGQ9H095 443 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms