RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PHEXP78562 749 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 TMEM35AQ53FP2 167 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 ADNP2Q6IQ32 1131 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 TMEM151AQ8N4L1 468 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 PLPP5Q8NEB5 264 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 AENQ8WTP8 325 aaKnown RBP15.01□□□□□ -0.01
VAPA-204ENST00000577901 ZNF473Q8WTR7 871 aaKnown RBP15.01□□□□□ -0.01
VAPA-204ENST00000577901 MZB1Q8WU39 189 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 CMTM7Q96FZ5 175 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 LURAP1Q96LR2 239 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 KCNC2Q96PR1 638 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 F2RL3Q96RI0 385 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 SERINC2Q96SA4 455 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 ROGDIQ9GZN7 287 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 AICDAQ9GZX7 198 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 COPS7BQ9H9Q2 264 aaPredicted RBP15.01□□□□□ -0.01
VAPA-204ENST00000577901 PCTPQ9UKL6 214 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 TSC22D4Q9Y3Q8 395 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 ADGRG4Q8IZF6 3080 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 TACC2O95359 2948 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 CPAMD8Q8IZJ3 1885 aa15.01□□□□□ -0.01
VAPA-204ENST00000577901 SCN3AQ9NY46 2000 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CELSR1Q9NYQ6 3014 aa15□□□□□ -0.01
VAPA-204ENST00000577901 IGHV3-20A0A0C4DH32 117 aa15□□□□□ -0.01
VAPA-204ENST00000577901 A0A1W2PPM1 405 aa15□□□□□ -0.01
VAPA-204ENST00000577901 TLDC2A0PJX2 215 aa15□□□□□ -0.01
VAPA-204ENST00000577901 MAGEB17A8MXT2 336 aa15□□□□□ -0.01
VAPA-204ENST00000577901 H0YIV9 168 aa15□□□□□ -0.01
VAPA-204ENST00000577901 SLC19A2O60779 497 aa15□□□□□ -0.01
VAPA-204ENST00000577901 B4GALT2O60909 372 aa15□□□□□ -0.01
VAPA-204ENST00000577901 GLRA3O75311 464 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CDC123O75794 336 aaPredicted RBP15□□□□□ -0.01
VAPA-204ENST00000577901 WISP2O76076 250 aa15□□□□□ -0.01
VAPA-204ENST00000577901 TGFB1P01137 390 aa15□□□□□ -0.01
VAPA-204ENST00000577901 TUBBP07437 444 aa15□□□□□ -0.01
VAPA-204ENST00000577901 SBK3P0C264 359 aa15□□□□□ -0.01
VAPA-204ENST00000577901 PIK3CBP42338 1070 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CCT5P48643 541 aa15□□□□□ -0.01
VAPA-204ENST00000577901 MTTPP55157 894 aa15□□□□□ -0.01
VAPA-204ENST00000577901 IFFO1Q0D2I5 559 aa15□□□□□ -0.01
VAPA-204ENST00000577901 NSDHLQ15738 373 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CPSF6Q16630 551 aaKnown RBP eCLIP15□□□□□ -0.01
VAPA-204ENST00000577901 ZNF766Q5HY98 468 aa15□□□□□ -0.01
VAPA-204ENST00000577901 LCE2DQ5TA82 110 aaPredicted RBP15□□□□□ -0.01
VAPA-204ENST00000577901 ABHD17CQ6PCB6 329 aa15□□□□□ -0.01
VAPA-204ENST00000577901 XKRXQ6PP77 449 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CPEB2Q7Z5Q1 589 aaKnown RBP15□□□□□ -0.01
VAPA-204ENST00000577901 SHISA5Q8N114 240 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CA13Q8N1Q1 262 aa15□□□□□ -0.01
VAPA-204ENST00000577901 L3MBTL4Q8NA19 623 aa15□□□□□ -0.01
VAPA-204ENST00000577901 HUS1BQ8NHY5 278 aa15□□□□□ -0.01
VAPA-204ENST00000577901 EPS8L3Q8TE67 593 aaKnown RBP15□□□□□ -0.01
VAPA-204ENST00000577901 CAVIN3Q969G5 261 aa15□□□□□ -0.01
VAPA-204ENST00000577901 CENPKQ9BS16 269 aa15□□□□□ -0.01
VAPA-204ENST00000577901 TBCDQ9BTW9 1192 aa15□□□□□ -0.01
VAPA-204ENST00000577901 NTMT1Q9BV86 223 aa15□□□□□ -0.01
VAPA-204ENST00000577901 MS4A8Q9BY19 250 aa15□□□□□ -0.01
VAPA-204ENST00000577901 PARD6BQ9BYG5 372 aa15□□□□□ -0.01
VAPA-204ENST00000577901 RBCK1Q9BYM8 510 aa15□□□□□ -0.01
VAPA-204ENST00000577901 LANCL2Q9NS86 450 aa15□□□□□ -0.01
VAPA-204ENST00000577901 ANKRD17O75179 2603 aaKnown RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 A0A0G2JN53 185 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 A8MT66 165 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 OR7A17O14581 309 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 PRMT3O60678 531 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 TBX6O95947 436 aaPredicted RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 NUDT17P0C025 328 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ATP5F1P24539 256 aaPredicted RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 PTX3P26022 381 aaPredicted RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 HERVK_113P63132 956 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 RHAGQ02094 409 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ACTN3Q08043 901 aaPredicted RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 DDX39BQ13838 428 aaKnown RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 RCN2Q14257 317 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 C3AR1Q16581 482 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 AP5B1Q2VPB7 878 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 BTBD16Q32M84 506 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 FCRLBQ6BAA4 426 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 PLAG1Q6DJT9 500 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 LANCL3Q6ZV70 420 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 MILR1Q7Z6M3 343 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ANKRD37Q7Z713 158 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 SLC22A9Q8IVM8 553 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 CYP4X1Q8N118 509 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 BEST3Q8N1M1 668 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ADAMTS18Q8TE60 1221 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ZNF354BQ96LW1 612 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 PTCHD1Q96NR3 888 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 QRFPRQ96P65 431 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 C1QTNF3Q9BXJ4 246 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 ERVK-6Q9BXR3 956 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 SEMA4BQ9NPR2 832 aaPredicted RBP14.99□□□□□ -0.01
VAPA-204ENST00000577901 PRDM7Q9NQW5 492 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 GRID1Q9ULK0 1009 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 RNF11Q9Y3C5 154 aa14.99□□□□□ -0.01
VAPA-204ENST00000577901 OR2W5A6NFC9 320 aa14.98□□□□□ -0.01
VAPA-204ENST00000577901 C4orf51C9J302 202 aa14.98□□□□□ -0.01
VAPA-204ENST00000577901 CLDN4O14493 209 aa14.98□□□□□ -0.01
VAPA-204ENST00000577901 SUPT7LO94864 414 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms