RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PRAMEF20Q5VT98 475 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 AGTRAPQ6RW13 159 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 SPNS2Q8IVW8 549 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 TC2NQ8N9U0 490 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 GIMAP7Q8NHV1 300 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 NTNG2Q96CW9 530 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 OR8D2Q9GZM6 311 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 ZFP69BQ9UJL9 534 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 HEATR5AQ86XA9 2040 aa12.94□□□□□ -0.34
PPP4R1-206ENST00000577779 NRDCO43847 1150 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 ENO3P13929 434 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 NPPBP16860 134 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CCND1P24385 295 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 FDFT1P37268 417 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 RWDD2BP57060 319 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 SESN2P58004 480 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CCZ1BP86790 482 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CCZ1P86791 482 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 TBL3Q12788 808 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 FOXF2Q12947 444 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 ADGRD1Q6QNK2 874 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 LCTLQ6UWM7 567 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CYHR1Q6ZMK1 362 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 MBOAT1Q6ZNC8 495 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 PLEKHM3Q6ZWE6 761 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 STRA8Q7Z7C7 330 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 ZNF321PQ8N8H1 164 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 C9orf106Q8NAJ2 232 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 MORN4Q8NDC4 146 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 ABHD11Q8NFV4 315 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 OR4K1Q8NGD4 311 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 OR5L2Q8NGL0 311 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 OR8K3Q8NH51 312 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 DAZLQ92904 295 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 HAUS8Q9BT25 410 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 SFXN3Q9BWM7 321 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 SGPP1Q9BX95 441 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CALHM2Q9HA72 323 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 HOMER3Q9NSC5 361 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 ZNF226Q9NYT6 803 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CLDN16Q9Y5I7 305 aa12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-206ENST00000577779 CD5LO43866 347 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 SOX30O94993 753 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 APRTP07741 180 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 PAX1P15863 534 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 CR1P17927 2039 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 ARNTP27540 789 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 HNRNPFP52597 415 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 ATP5J2P56134 94 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 RUNX1T1Q06455 604 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 PIWIL4Q7Z3Z4 852 aaKnown RBP12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 TMEM52Q8NDY8 209 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 OR14A16Q8NHC5 309 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 PAQR8Q8TEZ7 354 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 PTPMT1Q8WUK0 201 aaPredicted RBP12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 TMEM171Q8WVE6 324 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 C19orf24Q9BVV8 132 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 AMBRA1Q9C0C7 1298 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 RBSNQ9H1K0 784 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 KLHL31Q9H511 634 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 SH2D2AQ9NP31 389 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 KLHL28Q9NXS3 571 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 IFNKQ9P0W0 207 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 PKD1L1Q8TDX9 2849 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
PPP4R1-206ENST00000577779 MYOCOSA0A1B0GUC4 107 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 C4orf51C9J302 202 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 TRAPPC6AO75865 159 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 FAM157CP0CG43 387 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 SMIM10L1P0DMW3 83 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 AHRP35869 848 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 CPOXP36551 454 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 MC3RP41968 323 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 SCTRP47872 440 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 BTN3A2P78410 334 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 ASPHQ12797 758 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 VEZF1Q14119 521 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 RCAN2Q14206 197 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 MPEG1Q2M385 716 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 PIGGQ5H8A4 983 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 VASNQ6EMK4 673 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 FAM47BQ8NA70 645 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 FAM13CQ8NE31 585 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 GABPB2Q8TAK5 448 aaPredicted RBP12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 SLC35B2Q8TB61 432 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 SMIM10Q96HG1 83 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 RUNDC3BQ96NL0 473 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 PIGQQ9BRB3 760 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 IL22Q9GZX6 179 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 SPNS1Q9H2V7 528 aa12.91□□□□□ -0.34
PPP4R1-206ENST00000577779 CXorf56Q9H5V9 222 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms