RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TRNAU1APQ9NX07 287 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 ASIC5Q9NY37 505 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ACSL6Q9UKU0 697 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HS3ST2Q9Y278 367 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SH3GLB1Q9Y371 365 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SNX8Q9Y5X2 465 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 DOCK6Q96HP0 2047 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 TMEM247A6NEH6 219 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 GABRR3A8MPY1 467 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 F8W735 103 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 PCDH7O60245 1069 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 FKTNO75072 461 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ATG13O75143 517 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 FGF18O76093 207 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ETHE1O95571 254 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 OLFM2O95897 454 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HSMCR30P0CW71 290 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 MPC1LP0DKB6 136 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SERPINB10P48595 397 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 CLK3P49761 638 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 GP2P55259 537 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 CDH12P55289 794 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RPP38P78345 283 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 NTHL1P78549 312 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SLC7A9P82251 487 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 MPP7Q5T2T1 576 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 PLPP4Q5VZY2 271 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 ZDHHC20Q5W0Z9 365 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 METTL2BQ6P1Q9 378 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 CCDC149Q6ZUS6 474 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 C22orf34Q6ZV56 151 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 IGFN1Q86VF2 1251 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 GALNT13Q8IUC8 556 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 NAGSQ8N159 534 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 SVOPQ8N4V2 548 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 C11orf65Q8NCR3 313 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 OR2A12Q8NGT7 310 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HUS1BQ8NHY5 278 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 RPL3LQ92901 407 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 MUL1Q969V5 352 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 HMG20AQ9NP66 347 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.13□□□□□ -1.59
VAPA-203ENST00000577539 FAM120CQ9NX05 1096 aaKnown RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 IMPAD1Q9NX62 359 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 STOX2Q9P2F5 926 aaPredicted RBP5.13□□□□□ -1.59
VAPA-203ENST00000577539 GMEB1Q9Y692 573 aa5.13□□□□□ -1.59
VAPA-203ENST00000577539 KCNE1BA0A087WTH5 132 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 LOC100506127A0A0U1RQW1 187 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 M0QX08 132 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 TNFRSF11BO00300 401 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 YY2O15391 372 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 LCKP06239 509 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 ETFAP13804 333 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 HSD3B1P14060 373 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 CSF2RAP15509 400 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 ZNF12P17014 697 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 HNF4AP41235 474 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 CCR2P41597 374 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 GABARAPL2P60520 117 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 ST8SIA6P61647 398 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 MC1RQ01726 317 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 SPIBQ01892 262 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 C2orf80Q0P641 193 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 TMEM115Q12893 351 aaPredicted RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 SP140Q13342 867 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 DMC1Q14565 340 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 CYP2A13Q16696 494 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 DGUOKQ16854 277 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 GGTA1PQ4G0N0 100 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 CDKL4Q5MAI5 379 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 CATSPEREQ5SY80 951 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 LIPJQ5W064 366 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 LAIR2Q6ISS4 152 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 MED27Q6P2C8 311 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 BRAT1Q6PJG6 821 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 SHISA2Q6UWI4 295 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 EIF3MQ7L2H7 374 aaKnown RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 PAGE2Q7Z2X7 111 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 SERPINA11Q86U17 422 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 RNF168Q8IYW5 571 aaPredicted RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 TAGAPQ8N103 731 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 TMEM52Q8NDY8 209 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 OR7G3Q8NG95 312 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 NDNFQ8TB73 568 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 FAR1Q8WVX9 515 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 IRF7Q92985 503 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 ECHDC3Q96DC8 303 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 MCCC1Q96RQ3 725 aaPredicted RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 TCF25Q9BQ70 676 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 DUSP15Q9H1R2 295 aaPredicted RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 CHCHD3Q9NX63 227 aaKnown RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 ENPP5Q9UJA9 477 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 RAB23Q9ULC3 237 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 FAM32AQ9Y421 112 aaKnown RBP5.12□□□□□ -1.59
VAPA-203ENST00000577539 AGAP14A8MT82 685 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 FADS2P1A8MWK0 482 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 GFYI3L273 518 aa5.12□□□□□ -1.59
VAPA-203ENST00000577539 SLC16A6O15403 523 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms