RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ASCL1P50553 236 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 HSD17B7P56937 341 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 DCAF7P61962 342 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 RNF4P78317 190 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CCZ1BP86790 482 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CCZ1P86791 482 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CDK16Q00536 496 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 PCBP2Q15366 365 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 HSP90AA5PQ58FG0 334 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 DRICH1Q6PGQ1 229 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 C4orf22Q6V702 233 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CXXC5Q7LFL8 322 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 MYO1HQ8N1T3 1032 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 TMEM132CQ8N3T6 1108 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 FAM47BQ8NA70 645 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 GOLM1Q8NBJ4 401 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 TRPV3Q8NET8 790 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 SPATA3Q8NHX4 192 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 PTPMT1Q8WUK0 201 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 LINGO1Q96FE5 620 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 LRRC46Q96FV0 321 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 FAR2Q96K12 515 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 SGCZQ96LD1 299 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 DESI2Q9BSY9 194 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 OR8D2Q9GZM6 311 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 RBSNQ9H1K0 784 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC6A15Q9H2J7 730 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 ADAP2Q9NPF8 381 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 IARS2Q9NSE4 1012 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 CLCA3PQ9Y6N3 262 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 KIAA1549Q9HCM3 1950 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 NCKAP5O14513 1909 aa9.33□□□□□ -0.92
NPLOC4-220ENST00000576940 NINQ8N4C6 2090 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 COL6A5A8TX70 2615 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SDR42E2A6NKP2 422 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 GOLGA8MH3BSY2 632 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SMAD7O15105 426 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 CTNSO60931 367 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 EPPINO95925 133 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 GABRB3P28472 473 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF136P52737 540 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 CDKN2DP55273 166 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 RAB38P57729 211 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SARNPP82979 210 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 REEP5Q00765 189 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ASPHQ12797 758 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SP140Q13342 867 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ELAVL1Q15717 326 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 FBXL19-AS1Q494R0 122 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 RBM20Q5T481 1227 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 PRAMEF20Q5VT98 475 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SHEQ5VZ18 495 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ADGRD1Q6QNK2 874 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 NXPE4Q6UWF7 544 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 TMPRSS11BQ86T26 416 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 THOC6Q86W42 341 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 CXorf67Q86X51 503 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 CSF3RQ99062 836 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 AIF1LQ9BQI0 150 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ALOXE3Q9BYJ1 711 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF629Q9UEG4 869 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 VTI1BQ9UEU0 232 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 MTRF1LQ9UGC7 380 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 ADAM21Q9UKJ8 722 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 IKZF3Q9UKT9 509 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC22A14Q9Y267 594 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 DYRK1BQ9Y463 629 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 FREM3P0C091 2139 aa9.32□□□□□ -0.92
NPLOC4-220ENST00000576940 LRIT2A6NDA9 550 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 CLCA1A8K7I4 914 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 FAM171A2A8MVW0 826 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 AHRRA9YTQ3 701 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 C17orf105B2RV13 164 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 INAFM1C9JVW0 142 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 H7C1Q1 480 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 CYR61O00622 381 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 ERI3O43414 337 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 ETHE1O95571 254 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 HRGP04196 525 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 HNRNPH1P31943 449 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 PLA2G16P53816 162 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 STX4Q12846 297 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 GPS1Q13098 491 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 PIGGQ5H8A4 983 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 SLC22A10Q63ZE4 541 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 OPN5Q6U736 354 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 ZNF595Q8IYB9 648 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 KLHDC8AQ8IYD2 350 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 FBXW8Q8N3Y1 598 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 MORN4Q8NDC4 146 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 OR5L2Q8NGL0 311 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 NEIL3Q8TAT5 605 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 CCT6BQ92526 530 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 DAZLQ92904 295 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 FBXL8Q96CD0 374 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 MS4A6EQ96DS6 147 aa9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 JSRP1Q96MG2 331 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-220ENST00000576940 YIPF4Q9BSR8 244 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms