RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	LGALS13	Q9UHV8	139 aa		13.23	□□□□□ -0.29
EDC4-210	ENST00000575507	PPIE	Q9UNP9	301 aa	Known RBP	13.23	□□□□□ -0.29
EDC4-210	ENST00000575507		A0A1B0GTL3	188 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	TLDC2	A0PJX2	215 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507		A1L4Q6	167 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	TMEM200C	A6NKL6	621 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PPP6C	O00743	305 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	OR7A17	O14581	309 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	CTNS	O60931	367 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	LDB3	O75112	727 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ETHE1	O95571	254 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	CLDN1	O95832	211 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	HIST1H1T	P22492	207 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PIK3CG	P48736	1102 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	SLC13A2	Q13183	592 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	DDX39B	Q13838	428 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	GTF2H2	Q13888	395 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ELOA	Q14241	798 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	CEP85L	Q5SZL2	805 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	OR4C11	Q6IEV9	310 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	GTF2H2C	Q6P1K8	395 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF595	Q8IYB9	648 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	SLC5A8	Q8N695	610 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF321P	Q8N8H1	164 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	B3GNT7	Q8NFL0	401 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PTPMT1	Q8WUK0	201 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	SREK1	Q8WXA9	508 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	UCN3	Q969E3	161 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PHF21B	Q96EK2	531 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	SCMH1	Q96GD3	660 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	NSUN5	Q96P11	429 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	KCNC2	Q96PR1	638 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	CDK15	Q96Q40	435 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	UTP23	Q9BRU9	249 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF717	Q9BY31	904 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ALOXE3	Q9BYJ1	711 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	LIN28A	Q9H9Z2	209 aa	Known RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	ZBTB26	Q9HCK0	441 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	TBK1	Q9UHD2	729 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	FBXW2	Q9UKT8	454 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507	SLC5A6	Q9Y289	635 aa		13.22	□□□□□ -0.29
EDC4-210	ENST00000575507		A0A088AWK7	358 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	TRBV11-1	A0A0K0K1C0	115 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CCDC189	A1A4V9	331 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	GOLGA6L10	A6NI86	522 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	SMIM23	A6NLE4	172 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CLDN4	O14493	209 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	PLPP1	O14494	284 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	LRRTM2	O43300	516 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	SCEL	O95171	688 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	SP1	P08047	785 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ZNF10	P21506	573 aa	Predicted RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	COL8A1	P27658	744 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	EEF1D	P29692	281 aa	Known RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	RPS13	P62277	151 aa	Known RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ID2	Q02363	134 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	OC90	Q02509	493 aa	Predicted RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	SLAMF1	Q13291	335 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	INA	Q16352	499 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	TMEM35A	Q53FP2	167 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	LIPJ	Q5W064	366 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CHSY3	Q70JA7	882 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	MYLK4	Q86YV6	388 aa	Predicted RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	OR4N5	Q8IXE1	308 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	LGI4	Q8N135	537 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	L3MBTL4	Q8NA19	623 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ARMC2	Q8NEN0	867 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	OR52B6	Q8NGF0	335 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	SUN3	Q8TAQ9	357 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	WDR20	Q8TBZ3	569 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ACMSD	Q8TDX5	336 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	UBE2E3	Q969T4	207 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	NCLN	Q969V3	563 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	MTFMT	Q96DP5	389 aa	Known RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CMTM7	Q96FZ5	175 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	DEFB126	Q9BYW3	111 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	NOL11	Q9H8H0	719 aa	Known RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ACTR8	Q9H981	624 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	LYRM4	Q9HD34	91 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	DMRT3	Q9NQL9	472 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	LRFN1	Q9P244	771 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ABI3	Q9P2A4	366 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	XPR1	Q9UBH6	696 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	TSC22D4	Q9Y3Q8	395 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	ANGPTL3	Q9Y5C1	460 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	PCDHGB6	Q9Y5F9	930 aa		13.21	□□□□□ -0.29
EDC4-210	ENST00000575507	CPAMD8	Q8IZJ3	1885 aa		13.21	□□□□□ -0.3
EDC4-210	ENST00000575507		H0YIV9	168 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	RGS16	O15492	202 aa	Predicted RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	ZNHIT1	O43257	154 aa		13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	EED	O75530	441 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	PRKRA	O75569	313 aa	Known RBP	13.2	□□□□□ -0.3
EDC4-210	ENST00000575507	STS	P08842	583 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms