RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C4orf33Q8N1A6 199 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ZNF321PQ8N8H1 164 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 BANPQ8N9N5 519 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 MDS2Q8NDY4 140 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 CATSPER1Q8NEC5 780 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 M1APQ8TC57 530 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 PTPMT1Q8WUK0 201 aaPredicted RBP8.11□□□□□ -1.11
SMG6-216ENST00000575176 CCT6BQ92526 530 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 SNRNP40Q96DI7 357 aaKnown RBP8.11□□□□□ -1.11
SMG6-216ENST00000575176 CMTM7Q96FZ5 175 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FRG2BQ96QU4 278 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TAAR6Q96RI8 345 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 HBEGFQ99075 208 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TBCDQ9BTW9 1192 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TMEM109Q9BVC6 243 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 YIPF2Q9BWQ6 316 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ACTR8Q9H981 624 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 PPCSQ9HAB8 311 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 PTGFRNQ9P2B2 879 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 PCDHGA11Q9Y5H2 935 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 IKBKGQ9Y6K9 419 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 FBN2P35556 2912 aa8.11□□□□□ -1.11
SMG6-216ENST00000575176 A0A1W2PR48 441 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 HRKO00198 91 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 B3GALT2O43825 422 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 TYROBPO43914 113 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 PRMT3O60678 531 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 LDB3O75112 727 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 SMIM24O75264 130 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 H2AFYO75367 372 aaKnown RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 NEURL1O76050 574 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 OR4F21O95013 312 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 AIFM1O95831 613 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 WDPCPO95876 746 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 PDYNP01213 254 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 IGKV3-11P04433 115 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 CHN1P15882 459 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 IMPDH1P20839 514 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 ETV4P43268 484 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 SKP1P63208 163 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 RAE1P78406 368 aaKnown RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 DUSP2Q05923 314 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 INPP5JQ15735 1006 aaPredicted RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 BTBD16Q32M84 506 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 AGAP7PQ5VUJ5 663 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 OR4C11Q6IEV9 310 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 LINC00696Q6ZRV3 163 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 CLNKQ7Z7G1 428 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 ZNF595Q8IYB9 648 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 MMP21Q8N119 569 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 LGI4Q8N135 537 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 BEST3Q8N1M1 668 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 METTL4Q8N3J2 472 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 TEX19Q8NA77 164 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 MYRIPQ8NFW9 859 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 ADAMTS18Q8TE60 1221 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 HAS2Q92819 552 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 UBE2E3Q969T4 207 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 APOPT1Q96IL0 206 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 SCYL1Q96KG9 808 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 PTCHD1Q96NR3 888 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 AGAP4Q96P64 663 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 SIGLEC12Q96PQ1 595 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 LMF1Q96S06 567 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 SLX1AQ9BQ83 275 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 MRPL1Q9BYD6 325 aaKnown RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 HES7Q9BYE0 225 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 PARD6BQ9BYG5 372 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 ACPTQ9BZG2 426 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 TRIM45Q9H8W5 580 aaPredicted RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 PLA2G3Q9NZ20 509 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 C19orf25Q9UFG5 118 aaPredicted RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 CES1P1Q9UKY3 287 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 CCL27Q9Y4X3 112 aa8.1□□□□□ -1.11
SMG6-216ENST00000575176 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
SMG6-216ENST00000575176 MYOCOSA0A1B0GUC4 107 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SERTM1A2A2V5 107 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SMIM23A6NLE4 172 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 MANBAO00462 879 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 PROM1O43490 865 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 CTNSO60931 367 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ZIC2O95409 532 aaPredicted RBP8.09□□□□□ -1.11
SMG6-216ENST00000575176 OTCP00480 354 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 F10P00742 488 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 GBAP04062 536 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ALPPP05187 535 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 KRT4P19013 534 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 SSR2P43308 183 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 CCNG1P51959 295 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 OR4D2P58180 307 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 DNAJB13P59910 316 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 ID2Q02363 134 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 LCP2Q13094 533 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 DUSP8Q13202 625 aa8.09□□□□□ -1.11
SMG6-216ENST00000575176 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms