RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
TSR1-203ENST00000575049 SH3TC1Q8TE82 1336 aa4.61□□□□□ -1.67
TSR1-203ENST00000575049 METP08581 1390 aa4.61□□□□□ -1.67
TSR1-203ENST00000575049 KIAA1217Q5T5P2 1943 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 A0A087WWV3 80 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 TRAV24A0A0B4J272 114 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 LOC100653049A0A140TA62 436 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 A0A1B0GVL5 298 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SPECC1L-ADORA2AF8WAN1 911 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 MS4A18H0YCH9 400 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 PDXKO00764 312 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 NVLO15381 856 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 ACSL4O60488 711 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SHOX2O60902 331 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 RBMXL2O75526 392 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 KRT34O76011 436 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CLDN7O95471 211 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 WNT1P04628 370 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 PABPC4LP0CB38 370 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 UBTFL6P0CB48 400 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 B4GALT1P15291 398 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 GNSP15586 552 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CD58P19256 250 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 HNF1AP20823 631 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 UGT1A1P22309 533 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DPP4P27487 766 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 PTGFRP43088 359 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ABCG1P45844 678 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SLC11A1P49279 550 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CEBPDP49716 269 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 NUMBP49757 651 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CCL11P51671 97 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 AP3M2P53677 418 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 RPL23AP62750 156 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 CSNK2A1P68400 391 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 MAT1AQ00266 395 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 LIPEQ05469 1076 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 TGM3Q08188 693 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 BST1Q10588 318 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ILF2Q12905 390 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 MSLNQ13421 630 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 CASP8Q14790 479 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DECR1Q16698 335 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SYT14P1Q58G82 188 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DCAF6Q58WW2 860 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CMPK2Q5EBM0 449 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CCDC122Q5T0U0 273 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ATF7IP2Q5U623 682 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 IL23RQ5VWK5 629 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SPECC1LQ69YQ0 1117 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 FAM109BQ6ICB4 259 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 CBLN3Q6UW01 205 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 STOX1Q6ZVD7 989 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ARHGAP22Q7Z5H3 698 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SERINC5Q86VE9 423 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CDR2LQ86X02 465 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 FAM131BQ86XD5 332 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 RBFAQ8N0V3 343 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 UBE2J2Q8N2K1 259 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SLC43A2Q8N370 569 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 LRRC57Q8N9N7 239 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CSNK2A3Q8NEV1 391 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 OR9A1PQ8NGU1 263 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SLC2A14Q8TDB8 520 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 TMIGD2Q96BF3 282 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 LRRC39Q96DD0 335 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 IFT74Q96LB3 600 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ATP6V1G3Q96LB4 118 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 CCDC17Q96LX7 622 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 RIOK1Q9BRS2 568 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 NPFFR1Q9GZQ6 430 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 MAGT1Q9H0U3 335 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 BOLA2Q9H3K6 86 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SLA2Q9H6Q3 261 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DCLRE1BQ9H816 532 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 PHPT1Q9NRX4 125 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 NPAP1Q9NZP6 1156 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DBF4Q9UBU7 674 aaPredicted RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 PLCL2Q9UPR0 1127 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 ATG4BQ9Y4P1 393 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.6□□□□□ -1.67
TSR1-203ENST00000575049 CARMIL3Q8ND23 1372 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 SLIT1O75093 1534 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 NWD1Q149M9 1564 aa4.6□□□□□ -1.67
TSR1-203ENST00000575049 OVOS2A0A0G2JMS6 1433 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 FAM240BA0A1B0GVZ2 78 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 MANSC4A6NHS7 340 aaPredicted RBP4.59□□□□□ -1.67
TSR1-203ENST00000575049 CASTOR2A6NHX0 329 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 ANKRD66B4E2M5 251 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 TMEM150CB9EJG8 249 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 FAM90A26D6RGX4 464 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 ZNF609O15014 1411 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 ALOX15BO15296 676 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 KCNN4O15554 427 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 SDC3O75056 442 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 DDNO94850 711 aaPredicted RBP4.59□□□□□ -1.67
TSR1-203ENST00000575049 STAG3L1P0CL83 205 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 SLC2A3P11169 496 aa4.59□□□□□ -1.67
TSR1-203ENST00000575049 CEACAM1P13688 526 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms