RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CD72P21854 359 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 DEFB128Q7Z7B8 93 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 MMAAQ8IVH4 418 aaKnown RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 REPS1Q96D71 796 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM169Q96HH4 297 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 RSPO3Q9BXY4 272 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 ANGPT4Q9Y264 503 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 SLITRK5O94991 958 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 POLR2EP19388 210 aaKnown RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TIE1P35590 1138 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 HTR3AP46098 478 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 ZMAT1Q5H9K5 638 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 RPS26P11Q5JNZ5 115 aaPredicted RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM220Q6QAJ8 160 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 UBQLNLQ8IYU4 475 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 FLCNQ8NFG4 579 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TP53INP1Q96A56 240 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TIFAQ96CG3 184 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TRMT61AQ96FX7 289 aaKnown RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 ZSCAN5AQ9BUG6 496 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 TPK1Q9H3S4 243 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 MYNNQ9NPC7 610 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 DNAJC27Q9NZQ0 273 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 GULP1Q9UBP9 304 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 REV1Q9UBZ9 1251 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 WBP11Q9Y2W2 641 aaKnown RBP18.19■□□□□ 0.5
SCARF1-206ENST00000573852 PDE4DIPQ5VU43 2346 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 A0A1W2PRU2 124 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 PIPSLA2A3N6 862 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 ARRDC5A6NEK1 342 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 TLR4O00206 839 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 RGS5O15539 181 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SOX14O95416 240 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 C1orf105O95561 183 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SRPRAP08240 638 aaKnown RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 PIPP12273 146 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 PRLHRP49683 370 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM115Q12893 351 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 GPR151Q8TDV0 419 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 ASB15Q8WXK1 588 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SORBS1Q9BX66 1292 aaKnown RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 C3orf14Q9HBI5 128 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 FZD3Q9NPG1 666 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 KCND3Q9UK17 655 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 N6AMT1Q9Y5N5 214 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 CXorf51AA0A1B0GTR3 108 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 LEFTY1O75610 366 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 KRT8P05787 483 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 TIMP2P16035 220 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 DSTNP60981 165 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 RHAGQ02094 409 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SEC23BQ15437 767 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 NDUFA5Q16718 116 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 POM121L1PQ3SYA9 428 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 ATAD3CQ5T2N8 411 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 TMCO2Q7Z6W1 182 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 ST13P5Q8NFI4 369 aaPredicted RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 APOBEC4Q8WW27 367 aaKnown RBP18.18■□□□□ 0.5
SCARF1-206ENST00000573852 GLYATL1Q969I3 302 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 FOPNLQ96NB1 174 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SLC6A16Q9GZN6 736 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 DYRK4Q9NR20 520 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 SRRDQ9UH36 339 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 CCL26Q9Y258 94 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 V9GYH0 126 aa18.18■□□□□ 0.5
SCARF1-206ENST00000573852 A6NL46 340 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 WWP2O00308 870 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 QSOX1O00391 747 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 RGS13O14921 159 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SEMA7AO75326 666 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 CSO75390 466 aaKnown RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 KRT75O95678 551 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 IL3P08700 152 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 C1GALT1C1LP0DN25 315 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 CSTF2P33240 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 TGM4P49221 684 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 RPS26P62854 115 aaKnown RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ARSIQ5FYB1 569 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 TMC8Q8IU68 726 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SLC34A3Q8N130 599 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SLC39A11Q8N1S5 342 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF740Q8NDX6 193 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 CXorf36Q9H7Y0 433 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 GPBP1L1Q9HC44 474 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SPATA7Q9P0W8 599 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF221Q9UK13 617 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 WASH3PC4AMC7 463 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 TEX28O15482 410 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 CAPN5O15484 640 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 OPRD1P41143 372 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 CRYBB2P43320 205 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 RFX2P48378 723 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ALDH9A1P49189 494 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ATN1P54259 1190 aaPredicted RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 PNLIPRP1P54315 467 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SP3Q02447 781 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms