RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 KCNJ2P63252 427 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 DHX9Q08211 1270 aaKnown RBP11.25□□□□□ -0.61
PRPF8-208ENST00000573716 PRAMEF20Q5VT98 475 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 OPN5Q6U736 354 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 MAATS1Q7Z4T9 603 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SCUBE1Q8IWY4 988 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF321PQ8N8H1 164 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 ANKRD53Q8N9V6 530 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 GOLM1Q8NBJ4 401 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 TMEM52Q8NDY8 209 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 TRPV3Q8NET8 790 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SLC5A11Q8WWX8 675 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 CCT6BQ92526 530 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 NEIL2Q969S2 332 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 Q96MF0 132 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 RUNDC3BQ96NL0 473 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 OR4K3Q96R72 315 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 NDNQ99608 321 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 PPIEQ9UNP9 301 aaKnown RBP11.25□□□□□ -0.61
PRPF8-208ENST00000573716 ATG4BQ9Y4P1 393 aa11.25□□□□□ -0.61
PRPF8-208ENST00000573716 ARID1AO14497 2285 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 TCRBV7S3A2A0A539 114 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 C2orf72A6NCS6 295 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 GUCA1CO95843 209 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 IL2RAP01589 272 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 HSD17B7P56937 341 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 REEP5Q00765 189 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 SP140Q13342 867 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 RUNX2Q13950 521 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 ELAVL1Q15717 326 aaKnown RBP11.24□□□□□ -0.61
PRPF8-208ENST00000573716 FBXL19-AS1Q494R0 122 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 ACSF3Q4G176 576 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-208ENST00000573716 DUPD1Q68J44 220 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 LRRC8EQ6NSJ5 796 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 STRA8Q7Z7C7 330 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 TMPRSS11BQ86T26 416 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 SIMC1Q8NDZ2 872 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF592Q92610 1267 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 LINGO1Q96FE5 620 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 HES6Q96HZ4 224 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 AIF1LQ9BQI0 150 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 C20orf96Q9NUD7 363 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-208ENST00000573716 BOKQ9UMX3 212 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-208ENST00000573716 MRPS33Q9Y291 106 aaKnown RBP11.24□□□□□ -0.61
PRPF8-208ENST00000573716 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 COMMD10Q9Y6G5 202 aa11.24□□□□□ -0.61
PRPF8-208ENST00000573716 FBN1P35555 2871 aaKnown RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 NINQ8N4C6 2090 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 EIF3FO00303 357 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 CES2O00748 559 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 ERI3O43414 337 aaKnown RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF354AO60765 605 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 HAUS5O94927 633 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 LRATO95237 230 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 HRGP04196 525 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 SMIM10L1P0DMW3 83 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 VPS41P49754 854 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 RAB38P57729 211 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 RNF4P78317 190 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 STX4Q12846 297 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 TRIP13Q15645 432 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 HYAL4Q2M3T9 481 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 SLC22A10Q63ZE4 541 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 UGT3A1Q6NUS8 523 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 C4orf22Q6V702 233 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 LACC1Q8IV20 430 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 OR5L2Q8NGL0 311 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 OR56A3Q8NH54 315 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 NEIL3Q8TAT5 605 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 DAZLQ92904 295 aaKnown RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 BDH2Q9BUT1 245 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 TRIM54Q9BYV2 358 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 AICDAQ9GZX7 198 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF703Q9H7S9 590 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF629Q9UEG4 869 aaPredicted RBP11.23□□□□□ -0.61
PRPF8-208ENST00000573716 ADAM21Q9UKJ8 722 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 FBXO5Q9UKT4 447 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 CAMK2AQ9UQM7 478 aa11.23□□□□□ -0.61
PRPF8-208ENST00000573716 A0A1W2PPR1 153 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 C17orf105B2RV13 164 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 B3GALT2O43825 422 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 EPPINO95925 133 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 SERPINA6P08185 405 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TPSB2P20231 275 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 GDF1P27539 372 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ZNF136P52737 540 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 STXBP1P61764 594 aaKnown RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 SARNPP82979 210 aaKnown RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 CDK16Q00536 496 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 ASPHQ12797 758 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 CBLBQ13191 982 aa11.22□□□□□ -0.61
PRPF8-208ENST00000573716 SIX1Q15475 284 aaPredicted RBP11.22□□□□□ -0.61
PRPF8-208ENST00000573716 TPSAB1Q15661 275 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms