RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ELP5Q8TE02 316 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
RPAIN-207ENST00000570883 L3HYPDHQ96EM0 354 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 C19orf60Q96EN9 201 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 PARD6BQ9BYG5 372 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 KCNK13Q9HB14 408 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 PSD3Q9NYI0 1048 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 DCDC2Q9UHG0 476 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 FBXW2Q9UKT8 454 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
RPAIN-207ENST00000570883 NTNG1Q9Y2I2 539 aa12.55□□□□□ -0.4
RPAIN-207ENST00000570883 A0A0A6YYD5 115 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 MYOCOSA0A1B0GUC4 107 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 A8MUI8 341 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 PLIN3O60664 434 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 PRKRAO75569 313 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 MYO1DO94832 1006 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 OR4F21O95013 312 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 WDPCPO95876 746 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 UQCRHP07919 91 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 KRT4P19013 534 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 IMPDH1P20839 514 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 TSFMP43897 325 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ST13P50502 369 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 TNFSF10P50591 281 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ARFIP1P53367 373 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 SLC18A2Q05940 514 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZNF33BQ06732 778 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZNF169Q14929 603 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 SGO1Q5FBB7 561 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 TCHHL1Q5QJ38 904 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ACER2Q5QJU3 275 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 MRM1Q6IN84 353 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZYG11AQ6WRX3 759 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 SLC22A9Q8IVM8 553 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 IQCKQ8N0W5 287 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZCCHC7Q8N3Z6 543 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 MREGQ8N565 214 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 APCDD1LQ8NCL9 501 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 DNAJB14Q8TBM8 379 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ANKRD9Q96BM1 317 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 SNRNP40Q96DI7 357 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZNF382Q96SR6 550 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 SERPINI1Q99574 410 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 CENPKQ9BS16 269 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 RNF32Q9H0A6 362 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 GSTO2Q9H4Y5 243 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 DDX31Q9H8H2 851 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 TRPS1Q9UHF7 1281 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 LGALS13Q9UHV8 139 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ZNF223Q9UK11 482 aaPredicted RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 ATG4BQ9Y4P1 393 aa12.54□□□□□ -0.4
RPAIN-207ENST00000570883 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
RPAIN-207ENST00000570883 TLDC2A0PJX2 215 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 DYTNA2CJ06 578 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CLDN4O14493 209 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 FGF17O60258 216 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CTNSO60931 367 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 LDB3O75112 727 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 SEMA3DO95025 777 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ZIC2O95409 532 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 PDYNP01213 254 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 GBAP04062 536 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 MYL2P10916 166 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CPN2P22792 545 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CRHR1P34998 444 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ARG2P78540 354 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 TNFRSF17Q02223 184 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ID2Q02363 134 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 IFT88Q13099 833 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 RCN2Q14257 317 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 TLR1Q15399 786 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 TERF2Q15554 542 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 C10orf62Q5T681 223 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ABHD17BQ5VST6 288 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 C18orf63Q68DL7 685 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 TRABD2AQ86V40 505 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 GPR180Q86V85 440 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 BEST3Q8N1M1 668 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CISD2Q8N5K1 135 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CDYL2Q8N8U2 506 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 HAS2Q92819 552 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 HBEGFQ99075 208 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 MRPL1Q9BYD6 325 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ELOVL6Q9H5J4 265 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 CLMPQ9H6B4 373 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ADAP2Q9NPF8 381 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 PNO1Q9NRX1 252 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 PPIEQ9UNP9 301 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 ASB4Q9Y574 426 aa12.53□□□□□ -0.4
RPAIN-207ENST00000570883 SPTAN1Q13813 2472 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 SETXQ7Z333 2677 aaKnown RBP12.53□□□□□ -0.4
RPAIN-207ENST00000570883 EXPH5Q8NEV8 1989 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms