RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SCTRP47872 440 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 CCR8P51685 355 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 HSD17B7P56937 341 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 RWDD2BP57060 319 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 KCNJ2P63252 427 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC13A2Q13183 592 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 RUNX2Q13950 521 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 ELAVL1Q15717 326 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF791Q3KP31 576 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 KRTAP24-1Q3LI83 254 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PRAMEF20Q5VT98 475 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 CES3Q6UWW8 571 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 C20orf204Q6ZNR8 217 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PRUNE1Q86TP1 453 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PM20D2Q8IYS1 436 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 C9orf106Q8NAJ2 232 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PAQR8Q8TEZ7 354 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PTPMT1Q8WUK0 201 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 IGFBPL1Q8WX77 278 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PIK3IP1Q96FE7 263 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 KLHL42Q9P2K6 505 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 NDRG3Q9UGV2 375 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 ADAMTS6Q9UKP5 1117 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 BOKQ9UMX3 212 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 CAMK2AQ9UQM7 478 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF148Q9UQR1 794 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 PDE10AQ9Y233 779 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 CLCA3PQ9Y6N3 262 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 EXPH5Q8NEV8 1989 aa9.57□□□□□ -0.88
CTDNEP1-202ENST00000570380 MYOCOSA0A1B0GUC4 107 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 TCRBV7S2A1N4TA0A589 114 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 GOLGA6L9A6NEM1 432 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 RNF223E7ERA6 249 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 NRDCO43847 1150 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 APRTP07741 180 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 ENO3P13929 434 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 ETS1P14921 441 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 PAX1P15863 534 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CCND1P24385 295 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 GDF1P27539 372 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 AHRP35869 848 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLCO1A2P46721 670 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CPA2P48052 419 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CCZ1BP86790 482 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CCZ1P86791 482 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 KLF1Q13351 362 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 SF3B4Q15427 424 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 VASNQ6EMK4 673 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 LYPD8Q6UX82 237 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 SYDE1Q6ZW31 735 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CLNKQ7Z7G1 428 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 MEIOBQ8N635 442 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 TC2NQ8N9U0 490 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 ANKRD53Q8N9V6 530 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 MORN4Q8NDC4 146 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR8K3Q8NH51 312 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 DAZLQ92904 295 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 PYCR2Q96C36 320 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 NTNG2Q96CW9 530 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 JSRP1Q96MG2 331 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 WFIKKN1Q96NZ8 548 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR4K3Q96R72 315 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 PIGQQ9BRB3 760 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR8D2Q9GZM6 311 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 CALHM2Q9HA72 323 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 YAE1D1Q9NRH1 226 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 RAB6BQ9NRW1 208 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 DHRS7Q9Y394 339 aa9.56□□□□□ -0.88
CTDNEP1-202ENST00000570380 URADA6NGE7 173 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 PFDN6O15212 129 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 TLX2O43763 284 aaPredicted RBP9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 LRATO95237 230 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 ACSL3O95573 720 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 C1QAP02745 245 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 IFNA16P05015 189 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 OGNP20774 298 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 SOX18P35713 384 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 MC3RP41968 323 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 TPM4P67936 248 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 BTN3A2P78410 334 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 ASPHQ12797 758 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 PHKG1Q16816 387 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 MPEG1Q2M385 716 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 BBS9Q3SYG4 887 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 CHRFAM7AQ494W8 412 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 PIGGQ5H8A4 983 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 TOR1AIP1Q5JTV8 583 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 DCST1Q5T197 706 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 ZNF549Q6P9A3 640 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 CILP2Q8IUL8 1156 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 CPNE9Q8IYJ1 553 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 OR5L2Q8NGL0 311 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC2A12Q8TD20 617 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 SLC44A1Q8WWI5 657 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 SNF8Q96H20 258 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 WDYHV1Q96HA8 205 aa9.55□□□□□ -0.88
CTDNEP1-202ENST00000570380 GPR21Q99679 349 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms