RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TM4SF18Q96CE8 201 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 PPP1R36Q96LQ0 422 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 CRB3Q9BUF7 120 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 EBPLQ9BY08 206 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 FAM53CQ9NYF3 392 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 C3orf18Q9UK00 162 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 POLR3HQ9Y535 204 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-222ENST00000568034 TGFBR3LH3BV60 316 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PSMD12O00232 456 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-222ENST00000568034 SDHDO14521 159 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 NKX2-8O15522 239 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PROM1O43490 865 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 B4GALT2O60909 372 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 AIFM1O95831 613 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 MDH1P40925 334 aaKnown RBP16.93■□□□□ 0.3
COMMD4-222ENST00000568034 MAPK12P53778 367 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 MINDY4Q4G0A6 757 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 ATP1A1-AS1Q5TC04 95 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 C18orf63Q68DL7 685 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 NOXRED1Q6NXP6 359 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 QSOX2Q6ZRP7 698 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 RIPOR1Q6ZS17 1223 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PPP1R32Q7Z5V6 425 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 MMP21Q8N119 569 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PLPP5Q8NEB5 264 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 TSLPQ969D9 159 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 UCN3Q969E3 161 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PPP3R2Q96LZ3 170 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 PHF11Q9UIL8 331 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 MKL2Q9ULH7 1088 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 DLGAP4Q9Y2H0 992 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 HS3ST3B1Q9Y662 390 aa16.93■□□□□ 0.3
COMMD4-222ENST00000568034 IGKV3D-11A0A0A0MRZ8 115 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 SRRM3A6NNA2 597 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 WASHC1A8K0Z3 465 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 ZNF891A8MT65 544 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 TCP11X1B4DZS4 312 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 SLCO1B7G3V0H7 640 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 EDF1O60869 148 aaKnown RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 SEC22BO75396 215 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 CYC1P08574 325 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 ALOX15P16050 662 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 CPN2P22792 545 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 JAK1P23458 1154 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 TACR1P25103 407 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 EMP2P54851 167 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 TRA2BP62995 288 aaKnown RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 RPL38P63173 70 aaKnown RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 BTG2P78543 158 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 SSPNQ14714 243 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 UGT8Q16880 541 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 GALNTL6Q49A17 601 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 CRTC2Q53ET0 693 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 C6orf136Q5SQH8 315 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 TMEM205Q6UW68 189 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 TUBGCP3Q96CW5 907 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 MAELQ96JY0 434 aaKnown RBP16.92■□□□□ 0.3
COMMD4-222ENST00000568034 AKTIPQ9H8T0 292 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 CPNE5Q9HCH3 593 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 SEMA3GQ9NS98 782 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 RIC8BQ9NVN3 520 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 MS4A12Q9NXJ0 267 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 VTI1BQ9UEU0 232 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 MMACHCQ9Y4U1 282 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 USH1CQ9Y6N9 552 aa16.92■□□□□ 0.3
COMMD4-222ENST00000568034 USP24Q9UPU5 2620 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 ARHGAP10A1A4S6 786 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 K7ENP7 123 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 SOCS6O14544 535 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 PEX11AO75192 247 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 ALOX12BO75342 701 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 HEXBP07686 556 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 NR2F6P10588 404 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 SDC1P18827 310 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 MMP11P24347 488 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 CDC20Q12834 499 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 ATP6AP1LQ52LC2 224 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 NDUFAF5Q5TEU4 345 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 BROXQ5VW32 411 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 INO80CQ6PI98 192 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-222ENST00000568034 CCDC81Q6ZN84 652 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 LANCL3Q6ZV70 420 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 ZNF595Q8IYB9 648 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 C16orf78Q8WTQ4 265 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 NECTIN3Q9NQS3 549 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 PRTFDC1Q9NRG1 225 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 TMED5Q9Y3A6 229 aa16.91■□□□□ 0.3
COMMD4-222ENST00000568034 A0A1W2PQ72 361 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 FGF17O60258 216 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 IL3P08700 152 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 ANXA4P09525 319 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 PRKAR1AP10644 381 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 ACPPP15309 386 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 MAOAP21397 527 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 OTX2P32243 289 aa16.9■□□□□ 0.3
COMMD4-222ENST00000568034 BUD31P41223 144 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-222ENST00000568034 HSD17B7P56937 341 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms