RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF701Q9NV72 531 aaPredicted RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 MYOTQ9UBF9 498 aa8.34□□□□□ -1.07
VPS9D1-205ENST00000565452 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PSMD12O00232 456 aaPredicted RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PRMT5O14744 637 aaPredicted RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 EIF3HO15372 352 aaKnown RBP eCLIP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 KCNAB3O43448 404 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 RAD51CO43502 376 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 AVILO75366 819 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 MYO1DO94832 1006 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 MATN4O95460 622 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 IDUAP35475 653 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 VPS41P49754 854 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 NR1H2P55055 460 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 WNT3P56703 355 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 EEF1A1P68104 462 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 C2orf54Q08AI8 447 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 TBL3Q12788 808 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PHKG1Q16816 387 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 AARS2Q5JTZ9 985 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 RNASEH2BQ5TBB1 312 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 EEF1A1P5Q5VTE0 462 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 DUPD1Q68J44 220 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 CAPN13Q6MZZ7 669 aaPredicted RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 C8orf74Q6P047 294 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 AFTPHQ6ULP2 937 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PRUNE1Q86TP1 453 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ASPGQ86U10 573 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PDIK1LQ8N165 341 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF441Q8N8Z8 693 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 FBXO15Q8NCQ5 510 aaPredicted RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 LKAAEAR1Q8TD35 194 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ROBO4Q8WZ75 1007 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 CCDC138Q96M89 665 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 TIMP4Q99727 224 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 AARSD1Q9BTE6 412 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PHACTR1Q9C0D0 580 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 LIN28AQ9H9Z2 209 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 CALHM2Q9HA72 323 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 QPCTLQ9NXS2 382 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 GALNT8Q9NY28 637 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 PPIEQ9UNP9 301 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 RUVBL2Q9Y230 463 aaKnown RBP8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 VPS9D1Q9Y2B5 631 aa8.33□□□□□ -1.08
VPS9D1-205ENST00000565452 ABCA1O95477 2261 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 C15orf38-AP3S2A0A0A6YYH1 394 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF860A6NHJ4 632 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 E7ENX8 843 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 MYO1CO00159 1063 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 GALR3O60755 368 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SEC31AO94979 1220 aaKnown RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 TTC4O95801 387 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 GOT2P00505 430 aaKnown RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC35G6P0C7Q6 338 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 PAMP19021 973 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 CHRM3P20309 590 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 MAOAP21397 527 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 GRK3P35626 688 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SOX3P41225 446 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 MAGEA3P43357 314 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 DNASE1L1P49184 302 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 DIO3P55073 304 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 TAP2Q03519 686 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 VEZF1Q14119 521 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 ETFDHQ16134 617 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 RNF187Q5TA31 235 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC22A10Q63ZE4 541 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 OPN5Q6U736 354 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 LUZP2Q86TE4 346 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 GABPB2Q8TAK5 448 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 NCLNQ969V3 563 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 WFIKKN1Q96NZ8 548 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SERPINB12Q96P63 405 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 TRIB1Q96RU8 372 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 RASL10BQ96S79 203 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 PKP4Q99569 1192 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 LRRC1Q9BTT6 524 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 KIFC1Q9BW19 673 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 ZFP64Q9NPA5 681 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 SEMA4BQ9NPR2 832 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 NECTIN3Q9NQS3 549 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 PNO1Q9NRX1 252 aaKnown RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 LPAR3Q9UBY5 353 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 BOKQ9UMX3 212 aaPredicted RBP8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 TCAF1Q9Y4C2 921 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 ATG4BQ9Y4P1 393 aa8.32□□□□□ -1.08
VPS9D1-205ENST00000565452 IGKV3D-11A0A0A0MRZ8 115 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TCRBV7S3A2A0A539 114 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 MBD3L3A6NE82 208 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 DEFB108AA8MXU0 73 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 KDM4EB2RXH2 506 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 WWP2O00308 870 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PFDN6O15212 129 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 CATP04040 527 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TMIGD3P0DMS9 266 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 ALOX12P18054 663 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms