RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CHST10O43529 356 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 GUCY1B2O75343 617 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 SKAP2O75563 359 aaPredicted RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 CREG1O75629 220 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 MYO1DO94832 1006 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 CYC1P08574 325 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 RNH1P13489 461 aaKnown RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 CERS1P27544 350 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 TRA2BP62995 288 aaKnown RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 MC1RQ01726 317 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 NR6A1Q15406 480 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 CYP20A1Q6UW02 462 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 ZNF793Q6ZN11 406 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 Q6ZSR9 355 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 CA13Q8N1Q1 262 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 C1orf52Q8N6N3 182 aaKnown RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 LRTM1Q9HBL6 345 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 SLCO1B3Q9NPD5 702 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 PHF11Q9UIL8 331 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 MCM8Q9UJA3 840 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 DAPP1Q9UN19 280 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 FARSAQ9Y285 508 aaKnown RBP24.46■■□□□ 1.51
NME3-208ENST00000565379 KCNMB2Q9Y691 235 aa24.46■■□□□ 1.51
NME3-208ENST00000565379 ZNF860A6NHJ4 632 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 B3GALT4O96024 378 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 JAK1P23458 1154 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 RAB38P57729 211 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 GUCY1A3Q02108 690 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 BTKQ06187 659 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 SLAMF1Q13291 335 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 IL10RAQ13651 578 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 RUNX2Q13950 521 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 PDCD2Q16342 344 aaPredicted RBP24.45■■□□□ 1.5
NME3-208ENST00000565379 SMU1Q2TAY7 513 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 CCNYL2Q5T2Q4 361 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 PARP9Q8IXQ6 854 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 C7orf57Q8NEG2 295 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 APOBEC4Q8WW27 367 aaKnown RBP24.45■■□□□ 1.5
NME3-208ENST00000565379 MIEF2Q96C03 454 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 C11orf24Q96F05 449 aaPredicted RBP24.45■■□□□ 1.5
NME3-208ENST00000565379 APIPQ96GX9 242 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 MEAF6Q9HAF1 191 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 FAM53CQ9NYF3 392 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 HCN3Q9P1Z3 774 aa24.45■■□□□ 1.5
NME3-208ENST00000565379 MRPS33Q9Y291 106 aaKnown RBP24.45■■□□□ 1.5
NME3-208ENST00000565379 WBP11Q9Y2W2 641 aaKnown RBP24.45■■□□□ 1.5
NME3-208ENST00000565379 TCP11X1B4DZS4 312 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 LSM1O15116 133 aaKnown RBP24.44■■□□□ 1.5
NME3-208ENST00000565379 SEC22BO75396 215 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 TGDSO95455 350 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 KLK1P06870 262 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 ACPPP15309 386 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 PTPN4P29074 926 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 XCR1P46094 333 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 LIM2P55344 173 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 MAT1AQ00266 395 aaKnown RBP24.44■■□□□ 1.5
NME3-208ENST00000565379 NKG7Q16617 165 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 ATP6AP1LQ52LC2 224 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 CRTC2Q53ET0 693 aaPredicted RBP24.44■■□□□ 1.5
NME3-208ENST00000565379 FAM219BQ5XKK7 198 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 ENDOVQ8N8Q3 282 aaKnown RBP24.44■■□□□ 1.5
NME3-208ENST00000565379 OR5T3Q8NGG3 340 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 STT3BQ8TCJ2 826 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 TBC1D20Q96BZ9 403 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 ABHD17AQ96GS6 310 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 TUBD1Q9UJT1 453 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 PTGDR2Q9Y5Y4 395 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 NAV2Q8IVL1 2488 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 FER1L5A0AVI2 2057 aa24.44■■□□□ 1.5
NME3-208ENST00000565379 EDF1O60869 148 aaKnown RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 EEDO75530 441 aaKnown RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 BMP10O95393 424 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 RECKO95980 971 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 ZGLP1P0C6A0 271 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 FAM58BPP0C7Q3 252 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 KITP10721 976 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 MAPK1P28482 360 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 TPP2P29144 1249 aaPredicted RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 TLX1P31314 330 aaPredicted RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 TIA1P31483 386 aaKnown RBP eCLIP24.43■■□□□ 1.5
NME3-208ENST00000565379 MAPK12P53778 367 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 MAD2L1Q13257 205 aaPredicted RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 TUBB8Q3ZCM7 444 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 MRM1Q6IN84 353 aaKnown RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 GPR180Q86V85 440 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 OR2T11Q8NH01 316 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 C9orf43Q8TAL5 461 aaPredicted RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 TUBGCP3Q96CW5 907 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 SIKE1Q9BRV8 207 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 SORBS1Q9BX66 1292 aaKnown RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 NUF2Q9BZD4 464 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 KCMF1Q9P0J7 381 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 CTSFQ9UBX1 484 aa24.43■■□□□ 1.5
NME3-208ENST00000565379 MARCOQ9UEW3 520 aaPredicted RBP24.43■■□□□ 1.5
NME3-208ENST00000565379 UBR5O95071 2799 aaPredicted RBP24.42■■□□□ 1.5
NME3-208ENST00000565379 MED13Q9UHV7 2174 aa24.42■■□□□ 1.5
NME3-208ENST00000565379 SYNDIG1LA6NDD5 238 aa24.42■■□□□ 1.5
NME3-208ENST00000565379 PCDH17O14917 1159 aa24.42■■□□□ 1.5
NME3-208ENST00000565379 PCDH7O60245 1069 aa24.42■■□□□ 1.5
NME3-208ENST00000565379 DNAJB5O75953 348 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms