RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LAS2Q8IYD9 372 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 RHEBL1Q8TAI7 183 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 AGAP11Q8TF27 550 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 ZNF473Q8WTR7 871 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PTPMT1Q8WUK0 201 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 UBTD2Q8WUN7 234 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 MTFMTQ96DP5 389 aaKnown RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 SGCZQ96LD1 299 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 F2RL3Q96RI0 385 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 MS4A8Q9BY19 250 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 TSPAN10Q9H1Z9 355 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 HPF1Q9NWY4 346 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 ERVK-11Q9UQG0 969 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 ACOT9Q9Y305 439 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 ASB1Q9Y576 335 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 APCP25054 2843 aa11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 NCOA6Q14686 2063 aaPredicted RBP11.34□□□□□ -0.59
GTF3C1-204ENST00000564664 A0A087X1B8 175 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 A0A0G2JN53 185 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 K7EPI3 171 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 DYRK3O43781 588 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PIAS1O75925 651 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 SLC35E2BP0CK96 405 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 EPB42P16452 691 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 EPORP19235 508 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 TNNI3P19429 210 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 CD22P20273 847 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 HIST1H1TP22492 207 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ELAVL4P26378 380 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 CERS1P27544 350 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 GRNP28799 593 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PPP2R1BP30154 601 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PIK3CBP42338 1070 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 MSH2P43246 934 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ST13P50502 369 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 HNRNPFP52597 415 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM83EQ2M2I3 478 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 KBTBD12Q3ZCT8 623 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ARHGAP11AQ6P4F7 1023 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 CEP128Q6ZU80 1094 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 CHERPQ8IWX8 916 aaKnown RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PPM1NQ8N819 430 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ACOT4Q8N9L9 421 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM47BQ8NA70 645 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 TMEM52Q8NDY8 209 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ASB15Q8WXK1 588 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ESAMQ96AP7 390 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 DMRTA2Q96SC8 542 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ALG9Q9H6U8 611 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 COQ3Q9NZJ6 369 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 OPTCQ9UBM4 332 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 ZNF223Q9UK11 482 aaPredicted RBP11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 PCDHGA11Q9Y5H2 935 aa11.33□□□□□ -0.6
GTF3C1-204ENST00000564664 TMEM200CA6NKL6 621 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 TGFBR3LH3BV60 316 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 FANCGO15287 622 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 UGDHO60701 494 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 OR2J2O76002 312 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 COX7A2P14406 83 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 CNR1P21554 472 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 PTX3P26022 381 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 SSTR2P30874 369 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 TLX1P31314 330 aaPredicted RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 ETF1P62495 437 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 MRPS25P82663 173 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 GUCY2DQ02846 1103 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 TBL3Q12788 808 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 ACAP2Q15057 778 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 MPEG1Q2M385 716 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 NDUFAF5Q5TEU4 345 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 KHDRBS2Q5VWX1 349 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 LIPJQ5W064 366 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 OR4C11Q6IEV9 310 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 OPN5Q6U736 354 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 MDGA2Q7Z553 956 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 UBE3DQ7Z6J8 389 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 CLNKQ7Z7G1 428 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 GOLM1Q8NBJ4 401 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 PSD4Q8NDX1 1056 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 OR7G3Q8NG95 312 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 FAM57AQ8TBR7 257 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 FBXO25Q8TCJ0 367 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 FBF1Q8TES7 1133 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 TANKQ92844 425 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 RGMAQ96B86 450 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 REPS1Q96D71 796 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 RBM18Q96H35 190 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 ATOH8Q96SQ7 321 aa11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 TNPO3Q9Y5L0 923 aaKnown RBP11.32□□□□□ -0.6
GTF3C1-204ENST00000564664 A0A1B0GTH9 108 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 C17orf105B2RV13 164 aa11.31□□□□□ -0.6
GTF3C1-204ENST00000564664 SUPT3HB4E1H0 165 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms