RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 ATP5A1P25705 553 aaKnown RBP16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 SSR4P51571 173 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ETF1P62495 437 aaKnown RBP16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 HSF1Q00613 529 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 SERTAD2Q14140 314 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ZNF793Q6ZN11 406 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 MDGA2Q7Z553 956 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 EID3Q8N140 333 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 PPM1NQ8N819 430 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ACOT4Q8N9L9 421 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 OR14A16Q8NHC5 309 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 RHEBL1Q8TAI7 183 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 AGAP11Q8TF27 550 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ALOXE3Q9BYJ1 711 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ALG9Q9H6U8 611 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 TIMMDC1Q9NPL8 285 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 MYOTQ9UBF9 498 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 ADGRE2Q9UHX3 823 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 TSC22D4Q9Y3Q8 395 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 CLCA3PQ9Y6N3 262 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 FBN2P35556 2912 aa16.01■□□□□ 0.15
VPS9D1-203ENST00000563798 K7EPI3 171 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 PRRG2O14669 202 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 FAM155BO75949 473 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 CLDN14O95500 239 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 LTA4HP09960 611 aaKnown RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 MTHFD2P13995 350 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 HIST1H1TP22492 207 aaPredicted RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 PTGER1P34995 402 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 MSH2P43246 934 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 ARFIP1P53367 373 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 IGLV3-21P80748 117 aaPredicted RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 NAA30Q147X3 362 aaPredicted RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 CMPK2Q5EBM0 449 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 MED27Q6P2C8 311 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 HSDL2Q6YN16 418 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 CHSY3Q70JA7 882 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 CLNKQ7Z7G1 428 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 CMC1Q7Z7K0 106 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 SRRM1Q8IYB3 904 aaKnown RBP16■□□□□ 0.15
VPS9D1-203ENST00000563798 OR7G3Q8NG95 312 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 FAM57AQ8TBR7 257 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 FBF1Q8TES7 1133 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 MAPKAP1Q9BPZ7 522 aa16■□□□□ 0.15
VPS9D1-203ENST00000563798 TFECO14948 347 aaPredicted RBP15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 OR2J2O76002 312 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 TUBB4AP04350 444 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 CASQ1P31415 396 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 GMPRP36959 345 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 STX4Q12846 297 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 BMPR2Q13873 1038 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 CDSNQ15517 529 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 TRADDQ15628 312 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 DEPDC1Q5TB30 811 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 KHDRBS2Q5VWX1 349 aaKnown RBP15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 RAPH1Q70E73 1250 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 ACBD4Q8NC06 268 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 PSD4Q8NDX1 1056 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 ANKRD9Q96BM1 317 aaPredicted RBP15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 MTFMTQ96DP5 389 aaKnown RBP15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 CMTM7Q96FZ5 175 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 RASL10BQ96S79 203 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 OPTCQ9UBM4 332 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 ACOT9Q9Y305 439 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 SPACA6W5XKT8 324 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 PCNX1Q96RV3 2341 aa15.99■□□□□ 0.15
VPS9D1-203ENST00000563798 GTF3C1Q12789 2109 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 SYCE1LA8MT33 242 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 A8MVJ9 347 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 UBXN8O00124 270 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 KLK8O60259 260 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 IFNA16P05015 189 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 COX6B1P14854 86 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 EPB42P16452 691 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 PTGS2P35354 604 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 PIK3CBP42338 1070 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 HK2P52789 917 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 BIKQ13323 160 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 SLMAPQ14BN4 828 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 AP5B1Q2VPB7 878 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 GRHL2Q6ISB3 625 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 RGS9BPQ6ZS82 235 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 GDF7Q7Z4P5 450 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 CENPLQ8N0S6 344 aaPredicted RBP15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 DEPPQ9NTK1 212 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 RYDENQ9NUL5 291 aaKnown RBP15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 HPF1Q9NWY4 346 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 MS4A12Q9NXJ0 267 aa15.98■□□□□ 0.15
VPS9D1-203ENST00000563798 A0A087X1B8 175 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 A0A1B0GTH9 108 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 HMX2A2RU54 273 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 C17orf105B2RV13 164 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SUPT3HB4E1H0 165 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 RTCAO00442 366 aaKnown RBP15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 ZNHIT1O43257 154 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 HS6ST1O60243 411 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 LDB3O75112 727 aa15.97■□□□□ 0.15
VPS9D1-203ENST00000563798 SUPT3HO75486 399 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms