RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TMPRSS9Q7Z410 1059 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 MSRB3Q8IXL7 192 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 D2HGDHQ8N465 521 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF285Q96NJ3 590 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 UTS2RQ9UKP6 389 aa20.78■□□□□ 0.92
LINC01960-201ENST00000563759 TMEM150CB9EJG8 249 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 PROM1O43490 865 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF806P0C7X5 589 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 MSX2P35548 267 aaPredicted RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 SKP1P63208 163 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 OLR1P78380 273 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 C18orf63Q68DL7 685 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 ZNF621Q6ZSS3 439 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 PDSS2Q86YH6 399 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 NATD1Q8N6N6 113 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 SUMF1Q8NBK3 374 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 OR4D9Q8NGE8 314 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 SH3GL1Q99961 368 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 THUMPD3Q9BV44 507 aaKnown RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 ALG2Q9H553 416 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 SUCOQ9UBS9 1254 aaKnown RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 TRBV5-3A0A0A0MS03 114 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 A0A1W2PRB8 838 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 LDOC1O95751 146 aaPredicted RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 C6orf47O95873 294 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 NELFEP18615 380 aaKnown RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 CPN2P22792 545 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 PTPN6P29350 595 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 HNRNPFP52597 415 aaKnown RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 LIM2P55344 173 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 TNFRSF17Q02223 184 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 GPR19Q15760 415 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 PRSS53Q2L4Q9 553 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 RHBDD1Q8TEB9 315 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 KLHL6Q8WZ60 621 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 AURKBQ96GD4 344 aaPredicted RBP20.77■□□□□ 0.92
LINC01960-201ENST00000563759 DPYSL5Q9BPU6 564 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 MS4A12Q9NXJ0 267 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 FTSJ1Q9UET6 329 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 CD300AQ9UGN4 299 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 DAPP1Q9UN19 280 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 VPS4AQ9UN37 437 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 SPACA6W5XKT8 324 aa20.77■□□□□ 0.92
LINC01960-201ENST00000563759 HYKKA2RU49 373 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 ENTPD5O75356 428 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 OR2B3O76000 313 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 HOXB9P17482 250 aaPredicted RBP20.76■□□□□ 0.91
LINC01960-201ENST00000563759 RUNX2Q13950 521 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 SELPLGQ14242 412 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 SPATS1Q496A3 300 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 ZNF574Q6ZN55 896 aaPredicted RBP20.76■□□□□ 0.91
LINC01960-201ENST00000563759 IFNEQ86WN2 208 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 C10orf67Q8IYJ2 551 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 ARHGEF39Q8N4T4 335 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 OR9A4Q8NGU2 314 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 UCN3Q969E3 161 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 ASB9Q96DX5 294 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 C10orf90Q96M02 699 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 GFM1Q96RP9 751 aaKnown RBP20.76■□□□□ 0.91
LINC01960-201ENST00000563759 EDEM2Q9BV94 578 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 FANCEQ9HB96 536 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 LYRM4Q9HD34 91 aa20.76■□□□□ 0.91
LINC01960-201ENST00000563759 SGK494L7N484 410 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 ERAL1O75616 437 aaKnown RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 CKMT2P17540 419 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 TLX1P31314 330 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 HBA1P69905 142 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 LIPEQ05469 1076 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 SPEM2Q0P670 501 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 FLOT2Q14254 428 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 GRM7Q14831 915 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 RUNDC3AQ59EK9 446 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 GARNL3Q5VVW2 1013 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 SLC48A1Q6P1K1 146 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 DBX2Q6ZNG2 339 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 TTC29Q8NA56 475 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 ZBED6CLQ96FA7 236 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 PRRX2Q99811 253 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 ECSITQ9BQ95 431 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 ZNF282Q9UDV7 671 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 CLCA2Q9UQC9 943 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 CUL9Q8IWT3 2517 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 A0A0A6YYC8 382 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 I3L1I5 382 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 PGRMC2O15173 223 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 RDH16O75452 317 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 ANKRD34CP0C6C1 535 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 FOLR1P15328 257 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 NTSP30990 170 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 EEFSECP57772 596 aaKnown RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 TCF15Q12870 199 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 NIPAL1Q6NVV3 410 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 GPR135Q8IZ08 494 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 TRIML2Q8N7C3 387 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 OR5T3Q8NGG3 340 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 KCTD14Q9BQ13 255 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 CPPED1Q9BRF8 314 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 SPRTNQ9H040 489 aaPredicted RBP20.75■□□□□ 0.91
LINC01960-201ENST00000563759 IKZF5Q9H5V7 419 aa20.75■□□□□ 0.91
LINC01960-201ENST00000563759 SLC35C2Q9NQQ7 365 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms