RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 CLNKQ7Z7G1 428 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 KRT78Q8N1N4 520 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 OR5L2Q8NGL0 311 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 CCT6BQ92526 530 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 SARAFQ96BY9 339 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 CAPS2Q9BXY5 557 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 REXO4Q9GZR2 422 aaKnown RBP17.29■□□□□ 0.36
NME3-204ENST00000563498 SACM1LQ9NTJ5 587 aa17.29■□□□□ 0.36
NME3-204ENST00000563498 NIPBLQ6KC79 2804 aaeCLIP17.28■□□□□ 0.36
NME3-204ENST00000563498 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 NPEPPSL1A6NEC2 478 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 G3V3Y1 287 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 HCN1O60741 890 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 TBX6O95947 436 aaPredicted RBP17.28■□□□□ 0.36
NME3-204ENST00000563498 PEX19P40855 299 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 MAN2A2P49641 1150 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 PLA2G16P53816 162 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 RNF4P78317 190 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ABHD17CQ6PCB6 329 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ARSKQ6UWY0 536 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 FAM47EQ6ZV65 393 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 LIX1LQ8IVB5 337 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 RHBDF1Q96CC6 855 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 CSF3RQ99062 836 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ALOXE3Q9BYJ1 711 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 EHD1Q9H4M9 534 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 GPRC5BQ9NZH0 403 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ACAD8Q9UKU7 415 aa17.28■□□□□ 0.36
NME3-204ENST00000563498 ANKDD1BA6NHY2 528 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 P04436 131 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 HOXB4P17483 251 aaPredicted RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 CERS1P27544 350 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 ADH7P40394 386 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 GDF5P43026 501 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 STX4Q12846 297 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 SERTAD2Q14140 314 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 FRG1Q14331 258 aaKnown RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 SLC10A1Q14973 349 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 C1orf185Q5T7R7 199 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 WLSQ5T9L3 541 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 TRMT10BQ6PF06 316 aaKnown RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 FRA10AC1Q70Z53 315 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 PDIK1LQ8N165 341 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 C7orf57Q8NEG2 295 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 ACTRT1Q8TDG2 376 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 POLDIP3Q9BY77 421 aaKnown RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 OR8D2Q9GZM6 311 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 COPS7BQ9H9Q2 264 aaPredicted RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 CCM2LQ9NUG4 571 aaPredicted RBP17.27■□□□□ 0.36
NME3-204ENST00000563498 B4GALT7Q9UBV7 327 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 ASIC3Q9UHC3 531 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 ST6GALNAC2Q9UJ37 374 aa17.27■□□□□ 0.36
NME3-204ENST00000563498 ATP6AP2A0A1C7CYW4 349 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 C17orf105B2RV13 164 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ATP6AP2O75787 350 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 CELA3AP09093 270 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 GABRA1P14867 456 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 KLK2P20151 261 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ELK3P41970 407 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 DNASE1L1P49184 302 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 PPP2R2AP63151 447 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 TGM3Q08188 693 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 MPEG1Q2M385 716 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 RIPPLY2Q5TAB7 128 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 STEAP4Q687X5 459 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 VN1R5Q7Z5H4 357 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ZNF321PQ8N8H1 164 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 SLC2A12Q8TD20 617 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 SLCO2A1Q92959 643 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 LRRC39Q96DD0 335 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ROGDIQ9GZN7 287 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 LDAHQ9H6V9 325 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 LYRM4Q9HD34 91 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 PRDM7Q9NQW5 492 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ZNF358Q9NW07 568 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 TUBA8Q9NY65 449 aaPredicted RBP17.26■□□□□ 0.35
NME3-204ENST00000563498 CTNNAL1Q9UBT7 734 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 EDARQ9UNE0 448 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 PPP2R2CQ9Y2T4 447 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ATG4BQ9Y4P1 393 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 PCDHGB3Q9Y5G1 929 aa17.26■□□□□ 0.35
NME3-204ENST00000563498 ZNF354AO60765 605 aaPredicted RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 CCL3P10147 92 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 TNNI3P19429 210 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 KIR2DL3P43628 341 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 KCNC1P48547 511 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 TBL3Q12788 808 aaKnown RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 C18orf21Q32NC0 220 aaPredicted RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 ZC3HC1Q86WB0 502 aaKnown RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 ZZZ3Q8IYH5 903 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 WDR34Q96EX3 536 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 CFAP36Q96G28 342 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 KCNC2Q96PR1 638 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 CLEC4MQ9H2X3 399 aaPredicted RBP17.25■□□□□ 0.35
NME3-204ENST00000563498 RASSF1Q9NS23 344 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 COPS7AQ9UBW8 275 aa17.25■□□□□ 0.35
NME3-204ENST00000563498 PRRC2AP48634 2157 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms