RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 EIPR1Q53HC9 387 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ANKRD20A8PQ5CZ79 823 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ANKRD20A2Q5SQ80 823 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 TEX35Q5T0J7 233 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 MPP7Q5T2T1 576 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 DDI2Q5TDH0 399 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ANKRD20A1Q5TYW2 823 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ANKRD20A3Q5VUR7 823 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 LYPLAL1Q5VWZ2 237 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 REP15Q6BDI9 236 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 SNRNP48Q6IEG0 339 aaKnown RBP2.3□□□□□ -2.04
CHD9-207ENST00000562806 VITQ6UXI7 678 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 GALNTL5Q7Z4T8 443 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 SERINC5Q86VE9 423 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 KLHDC8AQ8IYD2 350 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 CLYBLQ8N0X4 340 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 OR8H3Q8N146 312 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 GVQW1Q8N7I0 195 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 KIAA0895Q8NCT3 520 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 RHOXF1Q8NHV9 184 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 TEKT1Q969V4 418 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ULK4Q96C45 1275 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 TNFRSF13CQ96RJ3 184 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 SPAG8Q99932 426 aaPredicted RBP2.3□□□□□ -2.04
CHD9-207ENST00000562806 HSD17B14Q9BPX1 270 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 ADPGKQ9BRR6 497 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 PLEKHA3Q9HB20 300 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 CIDEBQ9UHD4 219 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 NIP7Q9Y221 180 aaKnown RBP eCLIP2.3□□□□□ -2.04
CHD9-207ENST00000562806 CPQQ9Y646 472 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 AGRNO00468 2067 aa2.3□□□□□ -2.04
CHD9-207ENST00000562806 TP53BP1Q12888 1972 aaPredicted RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 A0A087WWV3 80 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 A0A087X0K7 114 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 MAGEB16A2A368 324 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 GTPBP10A4D1E9 387 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 ZNF840PA6NDX5 716 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 KLLNB2CW77 178 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 SLC33A1O00400 549 aaPredicted RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 SYT7O43581 403 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 FRAT2O75474 233 aaPredicted RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 CSDE1O75534 798 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 RENP00797 406 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 LYNP07948 512 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 FAM200BP0CF97 657 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 SKILP12757 684 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 PPP2R1BP30154 601 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 KHKP50053 298 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ST8SIA6P61647 398 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 BTG1P62324 171 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 FKBP1BP68106 108 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 CDKL1Q00532 357 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 MFGE8Q08431 387 aaPredicted RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 SCARB2Q14108 478 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 MEF2DQ14814 521 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 MEP1BQ16820 701 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 KBTBD12Q3ZCT8 623 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 NHSL2Q5HYW2 709 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ARMCX5Q6P1M9 558 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 TMEM64Q6YI46 380 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 LINC00696Q6ZRV3 163 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 NUFIP2Q7Z417 695 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 HOOK3Q86VS8 718 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 HPS6Q86YV9 775 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 TDHQ8IZJ6 230 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ZNF781Q8N8C0 355 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 SAMD12Q8N8I0 201 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 UXS1Q8NBZ7 420 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ICA1LQ8NDH6 482 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 RUNDC3BQ96NL0 473 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 GUCD1Q96NT3 240 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 RCHY1Q96PM5 261 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 APOL2Q9BQE5 337 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 UTP14AQ9BVJ6 771 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 CUEDC2Q9H467 287 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 MRPL17Q9NRX2 175 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 DNAJC17Q9NVM6 304 aaKnown RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 CLEC5AQ9NY25 188 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 PLEK2Q9NYT0 353 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ZNF107Q9UII5 783 aaPredicted RBP2.29□□□□□ -2.04
CHD9-207ENST00000562806 TMED7Q9Y3B3 224 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 ETV7Q9Y603 341 aa2.29□□□□□ -2.04
CHD9-207ENST00000562806 TRBV5-4A0A0C4DH59 114 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 GLTPD2A6NH11 291 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 RPL37AP8A6NKH3 93 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 RNF212BA8MTL3 300 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 SRRM5B3KS81 715 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 NEDD8-MDP1E9PL57 170 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 KIAA0513O60268 411 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 MELTFP08582 738 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 MMP10P09238 476 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 SELEP16581 610 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 BCL3P20749 454 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 BRCC3P46736 316 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 GSK3BP49841 420 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 SLC12A3P55017 1021 aa2.28□□□□□ -2.04
CHD9-207ENST00000562806 TRA2BP62995 288 aaKnown RBP2.28□□□□□ -2.04
CHD9-207ENST00000562806 TMEM44Q2T9K0 475 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms