RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 TLX1P31314 330 aaPredicted RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 CCNG1P51959 295 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 HNRNPFP52597 415 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 MLF1P58340 268 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 RBPJQ06330 500 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 C4orf17Q53FE4 359 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SPINK14Q6IE38 97 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 OR4C11Q6IEV9 310 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 PLD6Q8N2A8 252 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 TMEM156Q8N614 296 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 MDS2Q8NDY4 140 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 TMEM52Q8NDY8 209 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 DCAKDQ8WVC6 231 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 MTBPQ96DY7 904 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 PHF21BQ96EK2 531 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SIGLEC12Q96PQ1 595 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 NPAS2Q99743 824 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 MRPL57Q9BQC6 102 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 RHOXF2Q9BQY4 288 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 MRPL46Q9H2W6 279 aaKnown RBP16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SEC14L3Q9UDX4 400 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 PHF11Q9UIL8 331 aa16.65■□□□□ 0.26
CMTM3-204ENST00000562357 SPTAN1Q13813 2472 aaKnown RBP16.64■□□□□ 0.26
CMTM3-204ENST00000562357 A0A1B0GUH1 482 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 DYRK3O43781 588 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 MAN1A2O60476 641 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SLC25A12O75746 678 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ZFAND5O76080 213 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SIX3O95343 332 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 PPP2R1BP30154 601 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ARFIP1P53367 373 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SLAMF1Q13291 335 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 MAPKAPK3Q16644 382 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 C10orf62Q5T681 223 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ZNF324BQ6AW86 544 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SLC25A25Q6KCM7 469 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ZNF793Q6ZN11 406 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 UBE3DQ7Z6J8 389 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 OR14A16Q8NHC5 309 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 NCLNQ969V3 563 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SCMH1Q96GD3 660 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 MAPKAP1Q9BPZ7 522 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ALOXE3Q9BYJ1 711 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 NOL11Q9H8H0 719 aaKnown RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 ZNF358Q9NW07 568 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 PLEKHB1Q9UF11 243 aaPredicted RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 SPTBN1Q01082 2364 aaKnown RBP16.64■□□□□ 0.25
CMTM3-204ENST00000562357 MAST4O15021 2626 aa16.64■□□□□ 0.25
CMTM3-204ENST00000562357 USP9YO00507 2555 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 IQANK1A0A1B0GTG1 560 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 LRRC14BA6NHZ5 514 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 LRRTM2O43300 516 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 UNC5CO95185 931 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 SP1P08047 785 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 BUD31P41223 144 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 HLCSP50747 726 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 TDGF1P3P51864 188 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 KCNK10P57789 538 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 ALDH6A1Q02252 535 aaKnown RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 ZRSR2Q15696 482 aaKnown RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 CYP20A1Q6UW02 462 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 GALNTL5Q7Z4T8 443 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 ZCCHC7Q8N3Z6 543 aaKnown RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 L3MBTL4Q8NA19 623 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 MORN4Q8NDC4 146 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 KCMF1Q9P0J7 381 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 COPS7AQ9UBW8 275 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 VTI1BQ9UEU0 232 aa16.63■□□□□ 0.25
CMTM3-204ENST00000562357 PPIEQ9UNP9 301 aaKnown RBP16.63■□□□□ 0.25
CMTM3-204ENST00000562357 A1L4Q6 167 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 TGFBR3LH3BV60 316 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 RIPK2O43353 540 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 LDB3O75112 727 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 NEURL1O76050 574 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 LDLRP01130 860 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 TAC1P20366 129 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 ST13P50502 369 aaKnown RBP16.62■□□□□ 0.25
CMTM3-204ENST00000562357 CASP6P55212 293 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 PMP22Q01453 160 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 BIKQ13323 160 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 CUL3Q13618 768 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 HSDL2Q6YN16 418 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 GPR180Q86V85 440 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 LCA5Q86VQ0 697 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 NUDT13Q86X67 352 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 DGAT2Q96PD7 388 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 RPF2Q9H7B2 306 aaKnown RBP16.62■□□□□ 0.25
CMTM3-204ENST00000562357 WDR41Q9HAD4 459 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 LYARQ9NX58 379 aaKnown RBP16.62■□□□□ 0.25
CMTM3-204ENST00000562357 KLF13Q9Y2Y9 288 aaPredicted RBP16.62■□□□□ 0.25
CMTM3-204ENST00000562357 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
CMTM3-204ENST00000562357 HIVEP3Q5T1R4 2406 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms