RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 UPRTQ96BW1 309 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 SIPA1Q96FS4 1042 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 FCRL1Q96LA6 429 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 TMEM74Q96NL1 305 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 PIP5K1AQ99755 562 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 MSTO1Q9BUK6 570 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 CNPPD1Q9BV87 410 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 NFKBIZQ9BYH8 718 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 PRRG3Q9BZD7 231 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 ZDHHC5Q9C0B5 715 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 TNKS2Q9H2K2 1166 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 CHRDQ9H2X0 955 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 TTYH1Q9H313 450 aaPredicted RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 DPAGT1Q9H3H5 408 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 TUBB1Q9H4B7 451 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 NXF3Q9H4D5 531 aaKnown RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 OPA3Q9H6K4 179 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 REEP1Q9H902 201 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 CARS2Q9HA77 564 aaKnown RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 HHATLQ9HCP6 504 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 MID1IP1Q9NPA3 183 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 DLL4Q9NR61 685 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 EXD2Q9NVH0 621 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 TMLHEQ9NVH6 421 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 SLCO1C1Q9NYB5 712 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 NLKQ9UBE8 527 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 AFF4Q9UHB7 1163 aaKnown RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 IKZF3Q9UKT9 509 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 ZNF490Q9ULM2 529 aaPredicted RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 EDARQ9UNE0 448 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 GSTK1Q9Y2Q3 226 aa6.96□□□□□ -1.3
CDH1-203ENST00000561751 LSM2Q9Y333 95 aaKnown RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 FNDC1Q4ZHG4 1894 aaPredicted RBP6.96□□□□□ -1.3
CDH1-203ENST00000561751 POLR2AP24928 1970 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 RRN3P2A6NIE6 340 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ADARB2-AS1A8MUL3 147 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 LACTBL1A8MY62 500 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 E2F3O00716 465 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 PPP6CO00743 305 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 PLOD3O60568 738 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 LILRB5O75023 590 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 MITFO75030 526 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 CILPO75339 1184 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ATP6AP2O75787 350 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ANXA9O76027 345 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 RGS11O94810 467 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CYP17A1P05093 508 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 FABP3P05413 133 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 JUPP14923 745 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 HPGDP15428 266 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 RPS2P15880 293 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 LAG3P18627 525 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 RAB4AP20338 218 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 PRKACGP22612 351 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 PTPN3P26045 913 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 NMBRP28336 390 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ACSL1P33121 698 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TSPAN7P41732 249 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CAPZA2P47755 286 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 RFX3P48380 749 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 STARD6P59095 220 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 RAP2BP61225 183 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 UFM1P61960 85 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SNRPGP62308 76 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 ALDH6A1Q02252 535 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 ZNF155Q12901 538 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 C1DQ13901 141 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 GRM7Q14831 915 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TAF1AQ15573 450 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 SSX1Q16384 188 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SMN1Q16637 294 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 TSTQ16762 297 aaKnown RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 CARD16Q5EG05 197 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 C6orf136Q5SQH8 315 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SLC25A30Q5SVS4 291 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CLEC6AQ6EIG7 209 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 OR6B2Q6IFH4 312 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 TRNP1Q6NT89 227 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 C3orf33Q6P1S2 294 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 CES3Q6UWW8 571 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 WASH2PQ6VEQ5 465 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 C8orf86Q6ZUL3 223 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 DNAJB7Q7Z6W7 309 aaPredicted RBP6.95□□□□□ -1.3
CDH1-203ENST00000561751 C11orf96Q7Z7L8 435 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 SERPINA11Q86U17 422 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 HS3ST5Q8IZT8 346 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 Q8N3U1 123 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 FAM71CQ8NEG0 241 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 IPMKQ8NFU5 416 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 OR11H4Q8NGC9 324 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 OR5B17Q8NGF7 314 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 FBXO30Q8TB52 745 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 ASB12Q8WXK4 309 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 BSNDQ8WZ55 320 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 KCNJ9Q92806 393 aa6.95□□□□□ -1.3
CDH1-203ENST00000561751 KAT2AQ92830 837 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms