RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NOBOXO60393 691 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 CERS1P27544 350 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 CHI3L1P36222 383 aaPredicted RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 CRATP43155 626 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SUZ12Q15022 739 aaKnown RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 NRF1Q16656 503 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 COX20Q5RI15 118 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 GCNT6Q5T4J0 391 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 KLHL35Q6PF15 583 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 EIF3MQ7L2H7 374 aaKnown RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 MARVELD2Q8N4S9 558 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SLC35C2Q9NQQ7 365 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 PRDM9Q9NQV7 894 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 C5AR2Q9P296 337 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 UTS2RQ9UKP6 389 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 ACSL6Q9UKU0 697 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 CES1P1Q9UKY3 287 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 RNF103-CHMP3A0A140T963 221 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 ZSCAN9O15535 394 aaPredicted RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 P2RX6O15547 441 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 AQP9O43315 295 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 PROM1O43490 865 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 RASAL1O95294 804 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 AIFM1O95831 613 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 MT-ND1P03886 318 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SEMG1P04279 462 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 ETFAP13804 333 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SOAT1P35610 550 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 MAZP56270 477 aaKnown RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 BTN3A2P78410 334 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 EEF1A2Q05639 463 aaKnown RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 ELOAQ14241 798 aaKnown RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 CEBPEQ15744 281 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 ZNF630Q2M218 657 aaPredicted RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 LRRC23Q53EV4 343 aaPredicted RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 WDR45BQ5MNZ6 344 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 SLC48A1Q6P1K1 146 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 RNF130Q86XS8 419 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 TMEFF1Q8IYR6 380 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 CBR4Q8N4T8 237 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 OR5AK3PQ8NH89 298 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 UCN3Q969E3 161 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 OSBPL11Q9BXB4 747 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.23□□□□□ -0.45
SNX1-211ENST00000560829 SEMA6CQ9H3T2 930 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 ZSCAN32Q9NX65 697 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 MUTYHQ9UIF7 546 aa12.23□□□□□ -0.45
SNX1-211ENST00000560829 MYO1GB0I1T2 1018 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 ZNF888P0CJ79 500 aaPredicted RBP12.22□□□□□ -0.45
SNX1-211ENST00000560829 ARAFP10398 606 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 PVRP15151 417 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
SNX1-211ENST00000560829 CRYBA2P53672 197 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
SNX1-211ENST00000560829 DMWDQ09019 674 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 BLMHQ13867 455 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNX1-211ENST00000560829 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 ARMC6Q6NXE6 501 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 FAM180BQ6P0A1 224 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 ANGPTL8Q6UXH0 198 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 TMEM64Q6YI46 380 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 CCDC80Q76M96 950 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 ZNF761Q86XN6 746 aaPredicted RBP12.22□□□□□ -0.45
SNX1-211ENST00000560829 ZFP28Q8NHY6 868 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 TBC1D20Q96BZ9 403 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 AMDHD1Q96NU7 426 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 SERINC2Q96SA4 455 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 GLIPR2Q9H4G4 154 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
SNX1-211ENST00000560829 LOC105369274A0A096LPK9 316 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 LOC102723532A0A0G2JNH3 316 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 H0YGG7 62 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 DLGAP1O14490 977 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 PGRMC2O15173 223 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 BCAT2O15382 392 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 GCM2O75603 506 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 UBXN7O94888 489 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 ZNF10P21506 573 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 NTSP30990 170 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 MAGEA8P43361 318 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 CAPZBP47756 277 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 CDK9P50750 372 aaKnown RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.45
SNX1-211ENST00000560829 PPP1CAP62136 330 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 NHSL2Q5HYW2 709 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 C18orf63Q68DL7 685 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 ABHD13Q7L211 337 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 ZNF438Q7Z4V0 828 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 SLC30A8Q8IWU4 369 aa12.21□□□□□ -0.45
SNX1-211ENST00000560829 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms