RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 WDR20Q8TBZ3 569 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 THAP3Q8WTV1 239 aaPredicted RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 FRG2BQ96QU4 278 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 SERPINI1Q99574 410 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 UTP23Q9BRU9 249 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 NTMT1Q9BV86 223 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 ERVK-6Q9BXR3 956 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 ALOXE3Q9BYJ1 711 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 DEFB126Q9BYW3 111 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 CDCP1Q9H5V8 836 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 MS4A12Q9NXJ0 267 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 PHF11Q9UIL8 331 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 SNX6Q9UNH7 406 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 CNTRLQ7Z7A1 2325 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TRBV11-1A0A0K0K1C0 115 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ARHGAP10A1A4S6 786 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 SYNDIG1LA6NDD5 238 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 GABRR3A8MPY1 467 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TCP11X1B4DZS4 312 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 FOXE1O00358 373 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 PPP6CO00743 305 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 DLX3O60479 287 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CTNSO60931 367 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CDH16O75309 829 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 GLRA3O75311 464 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 GBAP04062 536 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 MYL2P10916 166 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 HSD17B3P37058 310 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 BUD31P41223 144 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CLCN2P51788 898 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ID2Q02363 134 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CLCQ05315 142 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TRAF3Q13114 568 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CUL3Q13618 768 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 SERTAD2Q14140 314 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 H3F3CQ6NXT2 135 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 GPR180Q86V85 440 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 RPS19BP1Q86WX3 136 aaKnown RBP12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 NUDT13Q86X67 352 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM132CQ8N3T6 1108 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM151AQ8N4L1 468 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 HORMAD2Q8N7B1 307 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 B3GNT7Q8NFL0 401 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ELP5Q8TE02 316 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 GRHL3Q8TE85 626 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 SELENOMQ8WWX9 145 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 TMEM237Q96Q45 408 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 RPF2Q9H7B2 306 aaKnown RBP12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 WDR41Q9HAD4 459 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 ADAP2Q9NPF8 381 aa12.13□□□□□ -0.47
CTDSPL2-209ENST00000560620 CPAMD8Q8IZJ3 1885 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 BLACEA4D250 179 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 TGFBR3LH3BV60 316 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 FCHO1O14526 889 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 COPEO14579 308 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 EEDO75530 441 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR4F21O95013 312 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 RASAL1O95294 804 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 ETHE1O95571 254 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 FAM58BPP0C7Q3 252 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 COX7A2P14406 83 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 KRT4P19013 534 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 MRPL49Q13405 166 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 ELAVL1Q15717 326 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 EIF2S3LQ2VIR3 472 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR4N5Q8IXE1 308 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR2W6PQ8NHA6 318 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 SREK1Q8WXA9 508 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 DAZLQ92904 295 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 NCLNQ969V3 563 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCDC126Q96EE4 140 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 MRPL1Q9BYD6 325 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR8D2Q9GZM6 311 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 RNF32Q9H0A6 362 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 KLHL1Q9NR64 748 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 FARSBQ9NSD9 589 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 LYARQ9NX58 379 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 AHSPQ9NZD4 102 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 GRID1Q9ULK0 1009 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 NTNG1Q9Y2I2 539 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 SPENQ96T58 3664 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 NBASA2RRP1 2371 aa12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 PRRC2CQ9Y520 2896 aaKnown RBP12.12□□□□□ -0.47
CTDSPL2-209ENST00000560620 A0A1B0GTL3 188 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 GLOD5A6NK44 160 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 C17orf105B2RV13 164 aa12.11□□□□□ -0.47
CTDSPL2-209ENST00000560620 DYRK3O43781 588 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms