RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 TUBB1Q9H4B7 451 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 NECTIN3Q9NQS3 549 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 PRDM9Q9NQV7 894 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 PRTFDC1Q9NRG1 225 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 NMRK1Q9NWW6 199 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 TEX10Q9NXF1 929 aaPredicted RBP14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 TRAF6Q9Y4K3 522 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 ATG4BQ9Y4P1 393 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 ASB4Q9Y574 426 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 DNAJC15Q9Y5T4 150 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 SPACA6W5XKT8 324 aa14.58□□□□□ -0.08
LYSMD2-204ENST00000560491 LOC102723996A0A087X1L8 192 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 IGHV1-45A0A0A0MS14 117 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 SERTM1A2A2V5 107 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 TMEM114B3SHH9 223 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 CYC1P08574 325 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 FGF4P08620 206 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 FAM58BPP0C7Q3 252 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 FAM87AP0C7U9 286 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 SLC1A6P48664 564 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 BST1Q10588 318 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 STX3Q13277 289 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 PCOLCEQ15113 449 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 UGT3A2Q3SY77 523 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 CCNYL2Q5T2Q4 361 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 PCSK4Q6UW60 755 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 MED25Q71SY5 747 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 PAGE2Q7Z2X7 111 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 TRIM46Q7Z4K8 759 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 SCUBE1Q8IWY4 988 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 ZNF781Q8N8C0 355 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 OR2T11Q8NH01 316 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 CHTF18Q8WVB6 975 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 TWIST2Q8WVJ9 160 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 FER1L6-AS2Q96M78 137 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 SORT1Q99523 831 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 ARHGAP9Q9BRR9 750 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 ACBD3Q9H3P7 528 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 ZNF160Q9HCG1 818 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 LYARQ9NX58 379 aaKnown RBP14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 PHF11Q9UIL8 331 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 ADAM29Q9UKF5 820 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 RALYQ9UKM9 306 aaKnown RBP14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 MRPS33Q9Y291 106 aaKnown RBP14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 MMACHCQ9Y4U1 282 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 CLDN16Q9Y5I7 305 aa14.57□□□□□ -0.08
LYSMD2-204ENST00000560491 IGKV3D-11A0A0A0MRZ8 115 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 MYOCOSA0A1B0GUC4 107 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 A0A1W2PQ72 361 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 A0A1W2PR48 441 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 ARHGAP10A1A4S6 786 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 A6NL46 340 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 ERVH48-1M5A8F1 160 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 PIP5K1BO14986 540 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 PROM1O43490 865 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 LDB3O75112 727 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 SEC24DO94855 1032 aaPredicted RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 AIFM1O95831 613 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 CELA2AP08217 269 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 LINC00032P0C843 101 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 GRK2P25098 689 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 CCL11P51671 97 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 RRADP55042 308 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 RAE1P78406 368 aaKnown RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 ID2Q02363 134 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 SLC13A2Q13183 592 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 SFT2D3Q587I9 215 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 SPDYAQ5MJ70 313 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 RIPOR1Q6ZS17 1223 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 NDUFAF7Q7L592 441 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 APLFQ8IW19 511 aaPredicted RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 DDIASQ8IXT1 998 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 ZNF595Q8IYB9 648 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 CLYBLQ8N0X4 340 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 TMEM102Q8N9M5 508 aaPredicted RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 UCN3Q969E3 161 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 WDR77Q9BQA1 342 aaPredicted RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 EBPLQ9BY08 206 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 ZNF700Q9H0M5 742 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 C19orf25Q9UFG5 118 aaPredicted RBP14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 CCL27Q9Y4X3 112 aa14.56□□□□□ -0.08
LYSMD2-204ENST00000560491 TNRC6AQ8NDV7 1962 aaKnown RBP14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 NSG1A0A0A6YYJ2 146 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 TCRBV16S1A1N1A0A5B0 115 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 GLOD5A6NK44 160 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 WASHC1A8K0Z3 465 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 CLDN4O14493 209 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 PCDH17O14917 1159 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 PCDH7O60245 1069 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 SKAP2O75563 359 aaPredicted RBP14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 RSL1D1O76021 490 aaKnown RBP14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 CHEK2O96017 543 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 HPP00738 406 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 NR2F6P10588 404 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 PPP2R1BP30154 601 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 BUD31P41223 144 aaPredicted RBP14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 MAPK12P53778 367 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 HSD17B7P56937 341 aa14.55□□□□□ -0.08
LYSMD2-204ENST00000560491 OR4D2P58180 307 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms