RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RIPOR3Q96MK2 946 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 IL17FQ96PD4 163 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 FERD3LQ96RJ6 166 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SIGLEC11Q96RL6 698 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 PIP5K1AQ99755 562 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 MAPKAP1Q9BPZ7 522 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SLC17A9Q9BYT1 436 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 KIR3DX1Q9H7L2 352 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 NECTIN3Q9NQS3 549 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 EXD2Q9NVH0 621 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 LMCD1Q9NZU5 365 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 RAPGEFL1Q9UHV5 662 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 MSRAQ9UJ68 235 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 KCND3Q9UK17 655 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 ZFR2Q9UPR6 939 aaKnown RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 FAM32AQ9Y421 112 aaKnown RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 U3KQV3 271 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 TICRRQ7Z2Z1 1910 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 COL4A2P08572 1712 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 A0A0A6YYD5 115 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 A0A1W2PP55 124 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 C5orf58C9J3I9 102 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 SLC22A1O15245 554 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 RGS10O43665 173 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 PRICKLE3O43900 615 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 NDUFS2O75306 463 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 TBX6O95947 436 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 BCL10O95999 233 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 DNTTP04053 509 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 IFNW1P05000 195 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 CEACAM5P06731 702 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ACVR2AP27037 513 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 SOAT1P35610 550 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 GGT2P36268 569 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 POLR2IP36954 125 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 YAP1P46937 504 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 LBX1P52954 281 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 PLA2G16P53816 162 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MANFP55145 182 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 MC1RQ01726 317 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MEF2AQ02078 507 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 C16orf72Q14CZ0 275 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MOGQ16653 247 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ZNF829Q3KNS6 432 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 C2orf27AQ580R0 203 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 COX20Q5RI15 118 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ANGPTL8Q6UXH0 198 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 B3GNT8Q7Z7M8 397 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 RNF130Q86XS8 419 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 SFTPA1Q8IWL2 248 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 OR10G2Q8NGC3 310 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 OR2A1Q8NGT9 310 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 CREB3L4Q8TEY5 395 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 CIDECQ96AQ7 238 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 FKBP10Q96AY3 582 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 PPP1R14BQ96C90 147 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MYADMQ96S97 322 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ZNF607Q96SK3 696 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 INSM2Q96T92 566 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 APOOQ9BUR5 198 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 SPATA5L1Q9BVQ7 753 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 LGR4Q9BXB1 951 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 PLA2G2FQ9BZM2 168 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 LHPPQ9H008 270 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 CXorf36Q9H7Y0 433 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ZNF556Q9HAH1 456 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 ANKHQ9HCJ1 492 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 TRPV5Q9NQA5 729 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MBNL1Q9NR56 388 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 SEMA3GQ9NS98 782 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 LYARQ9NX58 379 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 ENPP5Q9UJA9 477 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 SNX7Q9UNH6 387 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 PCYT1BQ9Y5K3 369 aaPredicted RBP9.23□□□□□ -0.93
RTF1-206ENST00000560447 COLEC10Q9Y6Z7 277 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 MYO10Q9HD67 2058 aa9.23□□□□□ -0.93
RTF1-206ENST00000560447 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 SH3D21A4FU49 640 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 GRXCR1A8MXD5 290 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 K7EQS6 105 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 SAP18O00422 153 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 TNFRSF10CO14798 259 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 OR1F1O43749 312 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MITFO75030 526 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 SH3BGRLO75368 114 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 SERPINB7O75635 380 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 GABARAPO95166 117 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ATE1O95260 518 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ACP5P13686 325 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 CMPK1P30085 196 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 PPP2R1BP30154 601 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 NTSP30990 170 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 IGFALSP35858 605 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ST13P50502 369 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 RPP38P78345 283 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms