RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 TGM3Q08188 693 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 GTF2H2Q13888 395 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 PCBP2Q15366 365 aaKnown RBP eCLIP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SPINK14Q6IE38 97 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 GRHL2Q6ISB3 625 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 GTF2H2CQ6P1K8 395 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 RPS19BP1Q86WX3 136 aaKnown RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 ZGRF1Q86YA3 2104 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 PTGR2Q8N8N7 351 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 HUS1BQ8NHY5 278 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 RNF217Q8TC41 542 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SSC4DQ8WTU2 575 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 TRIM44Q96DX7 344 aaPredicted RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SCYL1Q96KG9 808 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 KCNC2Q96PR1 638 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SLX1AQ9BQ83 275 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 RHOXF2Q9BQY4 288 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 UTP23Q9BRU9 249 aaKnown RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SORBS1Q9BX66 1292 aaKnown RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 HES7Q9BYE0 225 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 ACTR8Q9H981 624 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 KCMF1Q9P0J7 381 aa13.74□□□□□ -0.21
IDH3A-219ENST00000560414 SPTBN1Q01082 2364 aaKnown RBP13.74□□□□□ -0.21
IDH3A-219ENST00000560414 CCDC189A1A4V9 331 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 KRT38O76015 456 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 RASAL1O95294 804 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 HSD17B7P56937 341 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 OC90Q02509 493 aaPredicted RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 OR1C1Q15619 314 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 TBCELQ5QJ74 424 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF468Q5VIY5 522 aaPredicted RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 TAOK1Q7L7X3 1001 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 GOLGA7Q7Z5G4 137 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF595Q8IYB9 648 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 ACOT4Q8N9L9 421 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 APCDD1LQ8NCL9 501 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 LRRN4CLQ8ND94 238 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 MDS2Q8NDY4 140 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 SRFBP1Q8NEF9 429 aaKnown RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 THAP3Q8WTV1 239 aaPredicted RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 PHF21BQ96EK2 531 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 CMTM7Q96FZ5 175 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 MTERF1Q99551 399 aaKnown RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 TBCDQ9BTW9 1192 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 IPPKQ9H8X2 491 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 ABI3Q9P2A4 366 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 XPR1Q9UBH6 696 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 MRPS33Q9Y291 106 aaKnown RBP13.73□□□□□ -0.21
IDH3A-219ENST00000560414 RNF11Q9Y3C5 154 aa13.73□□□□□ -0.21
IDH3A-219ENST00000560414 UTP20O75691 2785 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 TRBV11-1A0A0K0K1C0 115 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 EXOC1LA0A1B0GW35 172 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 WISP2O76076 250 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 RBP1P09455 135 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 FAM153BP0C7A2 387 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 MYBL2P10244 700 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 HIST1H1TP22492 207 aaPredicted RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 MST1P26927 711 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 GCAP28676 217 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 EEF1DP29692 281 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 PIK3CGP48736 1102 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 TDGF1P3P51864 188 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 MLF1P58340 268 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 RPS13P62277 151 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 ID2Q02363 134 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 INAQ16352 499 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 CPSF6Q16630 551 aaKnown RBP eCLIP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 AP5B1Q2VPB7 878 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 FAM153CQ494X1 144 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 TMEM35AQ53FP2 167 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 DEPDC1Q5TB30 811 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 KHDRBS2Q5VWX1 349 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 LIPJQ5W064 366 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 HIST2H2BCQ6DN03 193 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 B3GNT7Q8NFL0 401 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 ADAMTS18Q8TE60 1221 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 NR4A3Q92570 626 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 DEFB126Q9BYW3 111 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 NOL11Q9H8H0 719 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 LYRM4Q9HD34 91 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 DMRT3Q9NQL9 472 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF180Q9UJW8 692 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 ZNF223Q9UK11 482 aaPredicted RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 FBXW2Q9UKT8 454 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 SLC5A6Q9Y289 635 aa13.72□□□□□ -0.21
IDH3A-219ENST00000560414 TNPO3Q9Y5L0 923 aaKnown RBP13.72□□□□□ -0.21
IDH3A-219ENST00000560414 A1L4Q6 167 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 FIGNL2A6NMB9 653 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 OR7A17O14581 309 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 CTNSO60931 367 aa13.71□□□□□ -0.21
IDH3A-219ENST00000560414 LDB3O75112 727 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms