RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 DVL2O14641 736 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 P04436 131 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 MLNP12872 115 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 TERF1P54274 439 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 CDKN2DP55273 166 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 RAB38P57729 211 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 DCAF7P61962 342 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 RNF4P78317 190 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 NKX6-1P78426 367 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 CCZ1BP86790 482 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 CCZ1P86791 482 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 NXPE4Q6UWF7 544 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 TMEM139Q8IV31 216 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 ZNF595Q8IYB9 648 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 FBXW8Q8N3Y1 598 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 RNF10Q8N5U6 811 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 SPATA3Q8NHX4 192 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 CALML6Q8TD86 181 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 NUDT8Q8WV74 236 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 SREK1Q8WXA9 508 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 LINGO1Q96FE5 620 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 AIF1LQ9BQI0 150 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 ACKR4Q9NPB9 350 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 TAS2R13Q9NYV9 303 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 VTI1BQ9UEU0 232 aa18.23■□□□□ 0.51
RABGGTA-214ENST00000560163 TUBAL3A6NHL2 446 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 FAM171A2A8MVW0 826 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 EPPINO95925 133 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 GABRB3P28472 473 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 HNRNPH1P31943 449 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 PIGAP37287 484 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 RBBP5Q15291 538 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 HSP90AA5PQ58FG0 334 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 SHEQ5VZ18 495 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 OPN5Q6U736 354 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 CXorf67Q86X51 503 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 ATL1Q8WXF7 558 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 DAZLQ92904 295 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 GAL3ST3Q96A11 431 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 MS4A6EQ96DS6 147 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 LRRC46Q96FV0 321 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 QRFPRQ96P65 431 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 DESI2Q9BSY9 194 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 ZNF703Q9H7S9 590 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 PROK2Q9HC23 129 aa18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 BEX4Q9NWD9 120 aaPredicted RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-214ENST00000560163 RTTNQ86VV8 2226 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 A0A0G2JN53 185 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 A0A1W2PPR1 153 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 LRIT2A6NDA9 550 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 SYNDIG1LA6NDD5 238 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 CTNSO60931 367 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 TIMP3P35625 211 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 MAGEA3P43357 314 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 STXBP1P61764 594 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 TRIP13Q15645 432 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 ZNF791Q3KP31 576 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 RBM20Q5T481 1227 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 MAATS1Q7Z4T9 603 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 CLNKQ7Z7G1 428 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 THOC6Q86W42 341 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 LRRC25Q8N386 305 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 FAM47BQ8NA70 645 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 C2CD4AQ8NCU7 369 aaPredicted RBP18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 MCUQ8NE86 351 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 NEIL3Q8TAT5 605 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 LINC01560Q8TB33 94 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 FAR2Q96K12 515 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 COX4I2Q96KJ9 171 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 EXO5Q9H790 373 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 GRPEL1Q9HAV7 217 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 ATRQ13535 2644 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 STAB1Q9NY15 2570 aa18.21■□□□□ 0.51
RABGGTA-214ENST00000560163 MYOCOSA0A1B0GUC4 107 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 AHRRA9YTQ3 701 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 NRDCO43847 1150 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 GOSR1O95249 250 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 GUCA1CO95843 209 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 TBX6O95947 436 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 ZNF136P52737 540 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 WNT3P56703 355 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 MPEG1Q2M385 716 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 PIGGQ5H8A4 983 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 CIARTQ8N365 385 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 TXLNBQ8N3L3 684 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 OR14A16Q8NHC5 309 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 SIGLEC10Q96LC7 697 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 SERPINB12Q96P63 405 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 ALOXE3Q9BYJ1 711 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 TRIM54Q9BYV2 358 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 OR8D2Q9GZM6 311 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 ZNF395Q9H8N7 513 aaPredicted RBP18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 IARS2Q9NSE4 1012 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 MRPS33Q9Y291 106 aaKnown RBP18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 TLN2Q9Y4G6 2542 aa18.2■□□□□ 0.5
RABGGTA-214ENST00000560163 LRRC3CA6NJW4 275 aa18.19■□□□□ 0.5
RABGGTA-214ENST00000560163 CLCA1A8K7I4 914 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms