RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 GSTM5P46439 218 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 PCBP3P57721 371 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 CXCR4P61073 352 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 CSNK1G2P78368 415 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 PIGFQ07326 219 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 KIAA1211LQ6NV74 962 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 FAM124AQ86V42 546 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 OR5P2Q8WZ92 322 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 FAM3CQ92520 227 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 RGMAQ96B86 450 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 CAMK1GQ96NX5 476 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 PITX2Q99697 317 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 SLC17A9Q9BYT1 436 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 MKRN2Q9H000 416 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 LHX9Q9NQ69 397 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 THSD1Q9NS62 852 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 KCNK6Q9Y257 313 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 SLC17A4Q9Y2C5 497 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 TESMINQ9Y4I5 508 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 HEMK1Q9Y5R4 338 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 SNX8Q9Y5X2 465 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 LYVE1Q9Y5Y7 322 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 DMDP11532 3685 aa13.77□□□□□ -0.21
RABGGTA-212ENST00000559974 TNFRSF11BO00300 401 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PDPK1O15530 556 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 XPNPEP2O43895 674 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 JUNDP17535 347 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 TNFRSF1BP20333 461 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ALDH9A1P49189 494 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 DSTNP60981 165 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PRDX1Q06830 199 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 NPRL3Q12980 569 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 FAM180BQ6P0A1 224 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 B3GNT8Q7Z7M8 397 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 TSPYL5Q86VY4 417 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 OR14C36Q8NHC7 312 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 GAB3Q8WWW8 586 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 MUL1Q969V5 352 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ZNF300Q96RE9 604 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 RAB11FIP5Q9BXF6 653 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 C1QTNF7Q9BXJ2 289 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ABCG4Q9H172 646 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 SLAMF7Q9NQ25 335 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ADAM29Q9UKF5 820 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 FBXL21Q9UKT6 434 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 TPRKBQ9Y3C4 175 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 DGKBQ9Y6T7 804 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 A0A1B0GVG6 124 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 A0A1W2PPW3 197 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 E9PQ18 207 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 KCNJ13O60928 360 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 DNAJB5O75953 348 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ITGA2P17301 1181 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ITIH1P19827 911 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PCMT1P22061 227 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 EPHA2P29317 976 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PKLRP30613 574 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 FMO3P31513 532 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 IGFALSP35858 605 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 OR1E2P47887 323 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PLA2G16P53816 162 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 MANFP55145 182 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 TJAP1Q5JTD0 557 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 SAXO2Q658L1 398 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ADCK2Q7Z695 626 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 OR2L8Q8NGY9 312 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 GIPC3Q8TF64 312 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 GEMIN6Q8WXD5 167 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 NEURL3Q96EH8 262 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ZNF764Q96H86 408 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 XKR8Q9H6D3 395 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 C8orf33Q9H7E9 229 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 NEUROD4Q9HD90 331 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 PLEKHM1Q9Y4G2 1056 aa13.76□□□□□ -0.21
RABGGTA-212ENST00000559974 IGKV1-8A0A0C4DH67 115 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 PRR19A6NJB7 356 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 TMPRSS11DO60235 418 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 CLEC3AO75596 197 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 DNTTP04053 509 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 NTSR1P30989 418 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 PCBP4P57723 403 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 RPP38P78345 283 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 SPIBQ01892 262 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 FZD5Q13467 585 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 CCINQ13939 588 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 CLCA4Q14CN2 919 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 MAD2L1BPQ15013 274 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 FGD3Q5JSP0 725 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 UBE3DQ7Z6J8 389 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 ARMC8Q8IUR7 673 aa13.75□□□□□ -0.21
RABGGTA-212ENST00000559974 OR4C15Q8NGM1 316 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms